RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 EEF2KO00418 725 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 ARPC1BO15143 372 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 KERAO60938 352 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 MT-ND1P03886 318 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 FCER2P06734 321 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 APRTP07741 180 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 HCKP08631 526 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 HMOX1P09601 288 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 MBL2P11226 248 aaPredicted RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 VDRP11473 427 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 FOSL2P15408 326 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 AREGP15514 252 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 UGT1A6P19224 532 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 MTIF2P46199 727 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 HERV-K104P63124 156 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CCZ1BP86790 482 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CCZ1P86791 482 aaPredicted RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 TRADDQ15628 312 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CCL14Q16627 93 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 DCAF12Q5T6F0 453 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 NKAIN2Q5VXU1 208 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 RTL6Q6ICC9 239 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 RHBDD2Q6NTF9 364 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 TIPARPQ7Z3E1 657 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CDC20BQ86Y33 519 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 PARP8Q8N3A8 854 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 FGFRL1Q8N441 504 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 RTL3Q8N8U3 475 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 ZNRF1Q8ND25 227 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 RAB39BQ96DA2 213 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CXorf58Q96LI9 332 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 GPR137Q96N19 417 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 PRAM1Q96QH2 718 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 FUNDC2Q9BWH2 189 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 PUS3Q9BZE2 481 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CXXC4Q9H2H0 198 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 KCNMB3Q9NPA1 279 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 TRIM10Q9UDY6 481 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 CIDEBQ9UHD4 219 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 NARFQ9UHQ1 456 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 TDRKHQ9Y2W6 561 aaKnown RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 ATG4BQ9Y4P1 393 aa3.38□□□□□ -1.87
LRCH3-211ENST00000466054 KLF2Q9Y5W3 355 aaPredicted RBP3.38□□□□□ -1.87
LRCH3-211ENST00000466054 FER1L5A0AVI2 2057 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 A0A1B0GTH9 108 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 SH3PXD2BA1X283 911 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 ATP6V1G1O75348 118 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 SH3BGRLO75368 114 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 OR9G9P0C7N8 305 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 ID1P41134 155 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 LIMK2P53671 638 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 ZFP36L1Q07352 338 aaKnown RBP3.37□□□□□ -1.87
LRCH3-211ENST00000466054 COX10Q12887 443 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 HAGHQ16775 308 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 HFEQ30201 348 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 EPC2Q52LR7 807 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 ZNF506Q5JVG8 444 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 SEL1L3Q68CR1 1132 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 REP15Q6BDI9 236 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 HIST2H2AA3Q6FI13 130 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 ETFRF1Q6IPR1 90 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 CDC42EP5Q6NZY7 148 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 GPR142Q7Z601 462 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.37□□□□□ -1.87
LRCH3-211ENST00000466054 RDH11Q8TC12 318 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 FBXO25Q8TCJ0 367 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 PNPLA2Q96AD5 504 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 MRPL53Q96EL3 112 aaKnown RBP3.37□□□□□ -1.87
LRCH3-211ENST00000466054 CAPNS2Q96L46 248 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 C1orf147Q96MC9 270 aaPredicted RBP3.37□□□□□ -1.87
LRCH3-211ENST00000466054 C19orf43Q9BQ61 176 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 ACAT2Q9BWD1 397 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 LIME1Q9H400 295 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 TRMT6Q9UJA5 497 aaKnown RBP3.37□□□□□ -1.87
LRCH3-211ENST00000466054 DIMT1Q9UNQ2 313 aaKnown RBP3.37□□□□□ -1.87
LRCH3-211ENST00000466054 STYXL1Q9Y6J8 313 aa3.37□□□□□ -1.87
LRCH3-211ENST00000466054 TRIM49BA6NDI0 452 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 RPL37AP8A6NKH3 93 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 FOXI3A8MTJ6 420 aaPredicted RBP3.36□□□□□ -1.87
LRCH3-211ENST00000466054 VEGFDO43915 354 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 NME2P1O60361 137 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 DUSP11O75319 330 aaKnown RBP3.36□□□□□ -1.87
LRCH3-211ENST00000466054 SEMA4FO95754 770 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 HPP00738 406 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 RENP00797 406 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 ABHD2P08910 425 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 FOLR2P14207 255 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 ELK3P41970 407 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 TNFRSF4P43489 277 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 ACADSBP45954 432 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 NT5C2P49902 561 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 CNN1P51911 297 aaKnown RBP3.36□□□□□ -1.87
LRCH3-211ENST00000466054 CASP9P55211 416 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 SSTP61278 116 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 GSTO1P78417 241 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 PPP1R8Q12972 351 aaKnown RBP3.36□□□□□ -1.87
LRCH3-211ENST00000466054 CBX3Q13185 183 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 EMC2Q15006 297 aa3.36□□□□□ -1.87
LRCH3-211ENST00000466054 EXOSC7Q15024 291 aaKnown RBP3.36□□□□□ -1.87
LRCH3-211ENST00000466054 PCK2Q16822 640 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms