RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 MPEG1Q2M385 716 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 CCNYL2Q5T2Q4 361 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 NDUFAF5Q5TEU4 345 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 LYPD8Q6UX82 237 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 NCCRP1Q6ZVX7 275 aaPredicted RBP20.14■□□□□ 0.81
LIME1-203ENST00000465591 EIF1ADQ8N9N8 165 aaKnown RBP20.14■□□□□ 0.81
LIME1-203ENST00000465591 C7orf57Q8NEG2 295 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 OR2M7Q8NG81 312 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 OR52N2Q8NGI0 321 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 RIT1Q92963 219 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 ZNF382Q96SR6 550 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 SNX6Q9UNH7 406 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 TEX15Q9BXT5 2789 aa20.14■□□□□ 0.81
LIME1-203ENST00000465591 MANBAO00462 879 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 CT62P0C5K7 136 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 SLC35E2P0CK97 266 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 SLCO1A2P46721 670 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 HTR6P50406 440 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 SLC37A1P57057 533 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 RTL4Q6ZR62 310 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 UBLCP1Q8WVY7 318 aaPredicted RBP20.13■□□□□ 0.81
LIME1-203ENST00000465591 L3HYPDHQ96EM0 354 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 ART5Q96L15 291 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 PELOQ9BRX2 385 aaKnown RBP20.13■□□□□ 0.81
LIME1-203ENST00000465591 BRF2Q9HAW0 419 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 AHSPQ9NZD4 102 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 NCKAP5O14513 1909 aa20.13■□□□□ 0.81
LIME1-203ENST00000465591 G3V2L1 256 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 GSTA1P08263 222 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 CCL3P10147 92 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 TNFRSF8P28908 595 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 SSTR4P31391 388 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 MAPK12P53778 367 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 EBPQ15125 230 aaKnown RBP20.12■□□□□ 0.81
LIME1-203ENST00000465591 RASA2Q15283 850 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 ZNF791Q3KP31 576 aaPredicted RBP20.12■□□□□ 0.81
LIME1-203ENST00000465591 OPN5Q6U736 354 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 GPRIN3Q6ZVF9 776 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 PAGE2Q7Z2X7 111 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 C1orf52Q8N6N3 182 aaKnown RBP20.12■□□□□ 0.81
LIME1-203ENST00000465591 TM4SF18Q96CE8 201 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 PHF12Q96QT6 1004 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 C12orf65Q9H3J6 166 aaKnown RBP20.12■□□□□ 0.81
LIME1-203ENST00000465591 GSTO2Q9H4Y5 243 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 CXorf21Q9HAI6 301 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 SUCOQ9UBS9 1254 aaKnown RBP20.12■□□□□ 0.81
LIME1-203ENST00000465591 CES1P1Q9UKY3 287 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 PCDHA9Q9Y5H5 950 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 EXPH5Q8NEV8 1989 aa20.12■□□□□ 0.81
LIME1-203ENST00000465591 FREM3P0C091 2139 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 A0A1B0GTH9 108 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 SMIM23A6NLE4 172 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 FAM166BA8MTA8 275 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 DYRK3O43781 588 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 ABOP16442 354 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 PIK3R1P27986 724 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 GALNSP34059 522 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 C3P1Q6ZMU1 363 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 RNF111Q6ZNA4 994 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 MRGPRGQ86SM5 289 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 DOLPP1Q86YN1 238 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 SLC22A9Q8IVM8 553 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 GOLM1Q8NBJ4 401 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 OR4K14Q8NGD5 310 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 EPS8L3Q8TE67 593 aaKnown RBP20.11■□□□□ 0.81
LIME1-203ENST00000465591 GAL3ST4Q96RP7 486 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 KCNA7Q96RP8 456 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 WWTR1Q9GZV5 400 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 DEFB127Q9H1M4 99 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 ANKZF1Q9H8Y5 726 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 SH2D2AQ9NP31 389 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 DCDC2Q9UHG0 476 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 PKDREJQ9NTG1 2253 aa20.11■□□□□ 0.81
LIME1-203ENST00000465591 UBFD1O14562 309 aaKnown RBP20.1■□□□□ 0.81
LIME1-203ENST00000465591 ADAM10O14672 748 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 CDC40O60508 579 aaKnown RBP eCLIP20.1■□□□□ 0.81
LIME1-203ENST00000465591 PDE9AO76083 593 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 PROCP04070 461 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 CNR1P21554 472 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 GRNP28799 593 aaKnown RBP20.1■□□□□ 0.81
LIME1-203ENST00000465591 DNASE1L1P49184 302 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 XKP51811 444 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 CASP6P55212 293 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 DUSP2Q05923 314 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 CDSNQ15517 529 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 ZNF441Q8N8Z8 693 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 METTL6Q8TCB7 284 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 AGAP11Q8TF27 550 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 CHTF18Q8WVB6 975 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 SGCZQ96LD1 299 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 TTTY12Q9BZ98 90 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 ACPTQ9BZG2 426 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 PLSCR2Q9NRY7 297 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 MEMO1Q9Y316 297 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 TIMM22Q9Y584 194 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 HRH3Q9Y5N1 445 aa20.1■□□□□ 0.81
LIME1-203ENST00000465591 GLRA3O75311 464 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 GLSO94925 669 aaPredicted RBP20.09■□□□□ 0.81
LIME1-203ENST00000465591 KRT6AP02538 564 aa20.09■□□□□ 0.81
LIME1-203ENST00000465591 KRT6BP04259 564 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms