RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 MARCOQ9UEW3 520 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-206ENST00000465560 TEKT2Q9UIF3 430 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF223Q9UK11 482 aaPredicted RBP18.92■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF780BQ9Y6R6 833 aa18.92■□□□□ 0.62
PTCD3-206ENST00000465560 TRBV11-1A0A0K0K1C0 115 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 A8MUI8 341 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 SLCO1B7G3V0H7 640 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 HDAC3O15379 428 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 DPM1O60762 260 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 BCKDHAP12694 445 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 CSNK2A2P19784 350 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-206ENST00000465560 SMU1Q2TAY7 513 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF750Q32MQ0 723 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 LINC00696Q6ZRV3 163 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 LRRC34Q8IZ02 419 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 SAMD14Q8IZD0 417 aaPredicted RBP18.91■□□□□ 0.62
PTCD3-206ENST00000465560 LGI4Q8N135 537 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 SLC5A8Q8N695 610 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 PIWIL2Q8TC59 973 aaKnown RBP18.91■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF721Q8TF20 911 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 CKAP2Q8WWK9 683 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 RIT1Q92963 219 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 EXOSC8Q96B26 276 aaKnown RBP18.91■□□□□ 0.62
PTCD3-206ENST00000465560 FBXL20Q96IG2 436 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 ART5Q96L15 291 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 TSSK3Q96PN8 268 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 C1orf50Q9BV19 199 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 AKTIPQ9H8T0 292 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 MIEF1Q9NQG6 463 aa18.91■□□□□ 0.62
PTCD3-206ENST00000465560 EXO1Q9UQ84 846 aaKnown RBP18.91■□□□□ 0.62
PTCD3-206ENST00000465560 VPS4BO75351 444 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 IGKV3-11P04433 115 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 ATP1B1P05026 303 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 KITP10721 976 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 FEN1P39748 380 aaKnown RBP18.9■□□□□ 0.62
PTCD3-206ENST00000465560 ASMTP46597 345 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 EMX2Q04743 252 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 NFATC3Q12968 1075 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 MAD2L1Q13257 205 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-206ENST00000465560 CEBPEQ15744 281 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 ABHD17BQ5VST6 288 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 FAM180BQ6P0A1 224 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 TICAM1Q8IUC6 712 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 CRLF3Q8IUI8 442 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 GALNT12Q8IXK2 581 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 LRRC25Q8N386 305 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF321PQ8N8H1 164 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 SENP5Q96HI0 755 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-206ENST00000465560 ZNF354BQ96LW1 612 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 MAGEB18Q96M61 343 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 NPAS2Q99743 824 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 DEFB126Q9BYW3 111 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 CXorf21Q9HAI6 301 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 SLC35C2Q9NQQ7 365 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 GIMAP4Q9NUV9 329 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 TAS2R7Q9NYW3 318 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 COPS7AQ9UBW8 275 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 ENTPD4Q9Y227 616 aa18.9■□□□□ 0.62
PTCD3-206ENST00000465560 SPENQ96T58 3664 aaKnown RBP18.9■□□□□ 0.62
PTCD3-206ENST00000465560 TRPC5OSA6NMA1 111 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
PTCD3-206ENST00000465560 PRB1P04280 392 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 PRPS2P11908 318 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 NT5EP21589 574 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ERVK-8P63133 956 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 DUSP2Q05923 314 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 MEP1AQ16819 746 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ACER2Q5QJU3 275 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 IL23RQ5VWK5 629 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 FCRLBQ6BAA4 426 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 HSDL2Q6YN16 418 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 WDR75Q8IWA0 830 aaKnown RBP18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ARMC10Q8N2F6 343 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 LIX1Q8N485 282 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ARFGAP2Q8N6H7 521 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 CLHC1Q8NHS4 586 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ZNF764Q96H86 408 aaPredicted RBP18.89■□□□□ 0.61
PTCD3-206ENST00000465560 CNPPD1Q9BV87 410 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 RNF32Q9H0A6 362 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 SLCO1B3Q9NPD5 702 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ASIC5Q9NY37 505 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 NOP53Q9NZM5 478 aaKnown RBP18.89■□□□□ 0.61
PTCD3-206ENST00000465560 BAIAP2L1Q9UHR4 511 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 ERVK-19Q9WJR5 959 aa18.89■□□□□ 0.61
PTCD3-206ENST00000465560 EIF3LQ9Y262 564 aaKnown RBP18.89■□□□□ 0.61
PTCD3-206ENST00000465560 HRKO00198 91 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 SDHDO14521 159 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 TBX19O60806 448 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 ZFAND5O76080 213 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 CT62P0C5K7 136 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 CD97P48960 835 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 KLRB1Q12918 225 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 ZNF267Q14586 743 aaPredicted RBP18.88■□□□□ 0.61
PTCD3-206ENST00000465560 PRICKLE4Q2TBC4 344 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 C6orf163Q5TEZ5 329 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 RGS9BPQ6ZS82 235 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 LARP4Q71RC2 724 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTCD3-206ENST00000465560 RPS19BP1Q86WX3 136 aaKnown RBP18.88■□□□□ 0.61
PTCD3-206ENST00000465560 ZADH2Q8N4Q0 377 aa18.88■□□□□ 0.61
PTCD3-206ENST00000465560 RBMXL3Q8N7X1 1067 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms