RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 TEKT2Q9UIF3 430 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ANAPC2Q9UJX6 822 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 PSME2Q9UL46 239 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 CSAG2Q9Y5P2 127 aa18.92■□□□□ 0.62
SKA3-205ENST00000465471 ATP6AP2A0A1C7CYW4 349 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 TMEM200CA6NKL6 621 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 A8MUI8 341 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 HRKO00198 91 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 SUV39H1O43463 412 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 PRKNO60260 465 aaPredicted RBP18.91■□□□□ 0.62
SKA3-205ENST00000465471 OR10H2O60403 315 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ATP6AP2O75787 350 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 CLPSP04118 112 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ATP1B1P05026 303 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 PORP16435 677 aaPredicted RBP18.91■□□□□ 0.62
SKA3-205ENST00000465471 TNNI3P19429 210 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ALDH9A1P49189 494 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 DUSP2Q05923 314 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 PDCD2Q16342 344 aaPredicted RBP18.91■□□□□ 0.62
SKA3-205ENST00000465471 MEP1AQ16819 746 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 GALNTL6Q49A17 601 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 NADK2Q4G0N4 442 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 C6orf136Q5SQH8 315 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ABHD17BQ5VST6 288 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 SLC6A19Q695T7 634 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 FCRLBQ6BAA4 426 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 TEX19Q8NA77 164 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 OR8K3Q8NH51 312 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ZNF75CPQ92670 426 aaPredicted RBP18.91■□□□□ 0.62
SKA3-205ENST00000465471 HAS2Q92819 552 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 RIT1Q92963 219 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 PNPLA2Q96AD5 504 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ZNF764Q96H86 408 aaPredicted RBP18.91■□□□□ 0.62
SKA3-205ENST00000465471 SENP5Q96HI0 755 aaPredicted RBP18.91■□□□□ 0.62
SKA3-205ENST00000465471 EGLN2Q96KS0 407 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 DEFB126Q9BYW3 111 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 OR8D2Q9GZM6 311 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 PFDN4Q9NQP4 134 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 PNPOQ9NVS9 261 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 TAS2R7Q9NYW3 318 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 UTS2RQ9UKP6 389 aa18.91■□□□□ 0.62
SKA3-205ENST00000465471 ZNF462Q96JM2 2506 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 CDK2AP1O14519 115 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 PEX11AO75192 247 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 ERAL1O75616 437 aaKnown RBP18.9■□□□□ 0.62
SKA3-205ENST00000465471 SORBS2O94875 1100 aaKnown RBP18.9■□□□□ 0.62
SKA3-205ENST00000465471 CSNK2A2P19784 350 aaPredicted RBP18.9■□□□□ 0.62
SKA3-205ENST00000465471 SOX18P35713 384 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 MLF1P58340 268 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 C2orf80Q0P641 193 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 SMU1Q2TAY7 513 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 ATP6AP1LQ52LC2 224 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 RPS19BP1Q86WX3 136 aaKnown RBP18.9■□□□□ 0.62
SKA3-205ENST00000465471 GALNT12Q8IXK2 581 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 BEST3Q8N1M1 668 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 Q8NA96 180 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 ART5Q96L15 291 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 STMN3Q9NZ72 180 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 B3GNT3Q9Y2A9 372 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 CROCCQ5TZA2 2017 aa18.9■□□□□ 0.62
SKA3-205ENST00000465471 DYRK3O43781 588 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 WDPCPO95876 746 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 CT62P0C5K7 136 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 BCKDHAP12694 445 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 FEN1P39748 380 aaKnown RBP18.89■□□□□ 0.61
SKA3-205ENST00000465471 ERVK-8P63133 956 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 MGAT2Q10469 447 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 FUT7Q11130 342 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 PRSS53Q2L4Q9 553 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 HSDL2Q6YN16 418 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 TICAM1Q8IUC6 712 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 LRRC34Q8IZ02 419 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 SAMD14Q8IZD0 417 aaPredicted RBP18.89■□□□□ 0.61
SKA3-205ENST00000465471 LRRC25Q8N386 305 aaPredicted RBP18.89■□□□□ 0.61
SKA3-205ENST00000465471 TUBGCP3Q96CW5 907 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 CDCP1Q9H5V8 836 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 MEAF6Q9HAF1 191 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 SLC35C2Q9NQQ7 365 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 ASIC5Q9NY37 505 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 COPS7AQ9UBW8 275 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 ERVK-19Q9WJR5 959 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 ZNF780BQ9Y6R6 833 aa18.89■□□□□ 0.61
SKA3-205ENST00000465471 TBX19O60806 448 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 ZFAND5O76080 213 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 S1PR1P21453 382 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 MAPK1P28482 360 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 CASRP41180 1078 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 TNFSF10P50591 281 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 SLC37A1P57057 533 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 RNF4P78317 190 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 C19orf57Q0VDD7 668 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 MAP4K2Q12851 820 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 PDE7AQ13946 482 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 ZNF267Q14586 743 aaPredicted RBP18.88■□□□□ 0.61
SKA3-205ENST00000465471 PRICKLE4Q2TBC4 344 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 FAM180BQ6P0A1 224 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 C9orf40Q8IXQ3 194 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 CDC26Q8NHZ8 85 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 SUN3Q8TAQ9 357 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 EXOSC8Q96B26 276 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms