RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 BBS4Q96RK4 519 aa13.76□□□□□ -0.21
HLA-F-223ENST00000465459 DUSP26Q9BV47 211 aa13.76□□□□□ -0.21
HLA-F-223ENST00000465459 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
HLA-F-223ENST00000465459 PPIEQ9UNP9 301 aaKnown RBP13.76□□□□□ -0.21
HLA-F-223ENST00000465459 ARL2BPQ9Y2Y0 163 aa13.76□□□□□ -0.21
HLA-F-223ENST00000465459 CLCA3PQ9Y6N3 262 aa13.76□□□□□ -0.21
HLA-F-223ENST00000465459 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 CROCCQ5TZA2 2017 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 CDC14CA4D256 554 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 SAGE2PA6NJ88 616 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 NKX2-8O15522 239 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 HPP00738 406 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 LAMP1P11279 417 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 COX6A1P12074 109 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 TNNI3P19429 210 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 S100A3P33764 101 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 FEN1P39748 380 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 RRADP55042 308 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 TMPRSS3P57727 454 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 AP2B1P63010 937 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 ID2Q02363 134 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 CDC20Q12834 499 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 MAP4K2Q12851 820 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 SRSF6Q13247 344 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 PCOLCEQ15113 449 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 EXT1Q16394 746 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 SPRED3Q2MJR0 410 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 PAPD4Q6PIY7 484 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 MSANTD1Q6ZTZ1 278 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 TMEM102Q8N9M5 508 aaPredicted RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 MORN4Q8NDC4 146 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 ZNF675Q8TD23 568 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 TSPEARQ8WU66 669 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 PTPMT1Q8WUK0 201 aaPredicted RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 SNRNP27Q8WVK2 155 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 RIT1Q92963 219 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 ART5Q96L15 291 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 TEX37Q96LM6 180 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 AMDHD1Q96NU7 426 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 WDR77Q9BQA1 342 aaPredicted RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 CXorf21Q9HAI6 301 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 SAR1AQ9NR31 198 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 PNO1Q9NRX1 252 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 FAM120CQ9NX05 1096 aaKnown RBP13.75□□□□□ -0.21
HLA-F-223ENST00000465459 FBXL4Q9UKA2 621 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 POLHQ9Y253 713 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 ACACBO00763 2458 aa13.75□□□□□ -0.21
HLA-F-223ENST00000465459 NSG1A0A0A6YYJ2 146 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 PRSS51A0A1B0GVH4 220 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 C17orf105B2RV13 164 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 K7ENP7 123 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 RNASET2O00584 256 aaKnown RBP13.74□□□□□ -0.21
HLA-F-223ENST00000465459 PGRP06401 933 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 IL12AP29459 219 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 NCBP2P52298 156 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-F-223ENST00000465459 POLR2JP52435 117 aaKnown RBP13.74□□□□□ -0.21
HLA-F-223ENST00000465459 NME5P56597 212 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 SF3A3Q12874 501 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-F-223ENST00000465459 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 RCAN2Q14206 197 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 PRSS53Q2L4Q9 553 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 MPEG1Q2M385 716 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 PGS1Q32NB8 556 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 FAM174BQ3ZCQ3 159 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 ZNF385BQ569K4 471 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 C6orf163Q5TEZ5 329 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 PLAG1Q6DJT9 500 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 ANKRD26P1Q6NSI1 321 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 INO80CQ6PI98 192 aaPredicted RBP13.74□□□□□ -0.21
HLA-F-223ENST00000465459 PAOXQ6QHF9 649 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 BLOC1S3Q6QNY0 202 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 GALNT12Q8IXK2 581 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 SUN3Q8TAQ9 357 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 OR5P2Q8WZ92 322 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 C8orf44Q96CB5 159 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 FBXL20Q96IG2 436 aa13.74□□□□□ -0.21
HLA-F-223ENST00000465459 ANKRD11Q6UB99 2663 aaPredicted RBP13.74□□□□□ -0.21
HLA-F-223ENST00000465459 ASPMQ8IZT6 3477 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 A0A1W2PRB8 838 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 SCN2BO60939 215 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 BCAS2O75934 225 aaPredicted RBP13.73□□□□□ -0.21
HLA-F-223ENST00000465459 NT5EP21589 574 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 ZFP36L2P47974 494 aaKnown RBP13.73□□□□□ -0.21
HLA-F-223ENST00000465459 MANFP55145 182 aaKnown RBP13.73□□□□□ -0.21
HLA-F-223ENST00000465459 KCNK10P57789 538 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 EEF1A2Q05639 463 aaKnown RBP13.73□□□□□ -0.21
HLA-F-223ENST00000465459 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 PRICKLE4Q2TBC4 344 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 ZNF750Q32MQ0 723 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 SPANXN4Q5MJ08 99 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 DCAF10Q5QP82 559 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 FUNDC1Q8IVP5 155 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 NFAM1Q8NET5 270 aaPredicted RBP13.73□□□□□ -0.21
HLA-F-223ENST00000465459 B3GNT7Q8NFL0 401 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 OR7G1Q8NGA0 311 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 PSMA8Q8TAA3 256 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 M1APQ8TC57 530 aa13.73□□□□□ -0.21
HLA-F-223ENST00000465459 CIDECQ96AQ7 238 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms