RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 LIPKQ5VXJ0 399 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 LRRTM1Q86UE6 522 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 CARM1Q86X55 608 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 ZFAND4Q86XD8 727 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 LEMD2Q8NC56 503 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 CNNM3Q8NE01 707 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 CHDHQ8NE62 594 aaPredicted RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 SSC4DQ8WTU2 575 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 TAF15Q92804 592 aaKnown RBP eCLIP3.89□□□□□ -1.79
USP25-207ENST00000464435 PNPLA2Q96AD5 504 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 C18orf12Q96KH6 178 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 AGAP4Q96P64 663 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 TSGA13Q96PP4 275 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 LGMNQ99538 433 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 SYT11Q9BT88 431 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 NMUR1Q9HB89 426 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.89□□□□□ -1.79
USP25-207ENST00000464435 NUDT4Q9NZJ9 180 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 CLIP2Q9UDT6 1046 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 IL20RAQ9UHF4 553 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 RRP15Q9Y3B9 282 aaKnown RBP3.89□□□□□ -1.79
USP25-207ENST00000464435 ATP6V0A2Q9Y487 856 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 ATG4BQ9Y4P1 393 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 CLCA3PQ9Y6N3 262 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 GON4LQ3T8J9 2241 aa3.89□□□□□ -1.79
USP25-207ENST00000464435 IGHV4-30-2A0A087WSY4 118 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 TMCO5BA8MYB1 307 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 SOCS3O14543 225 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 SH2D1BO14796 132 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 TFECO14948 347 aaPredicted RBP3.88□□□□□ -1.79
USP25-207ENST00000464435 OR6B1O95007 311 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 ADORA3P0DMS8 318 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 CYP11B1P15538 503 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 GNSP15586 552 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 TRIM23P36406 574 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 ACADSBP45954 432 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 RPS4XP62701 263 aaKnown RBP3.88□□□□□ -1.79
USP25-207ENST00000464435 IRX1P78414 480 aaPredicted RBP3.88□□□□□ -1.79
USP25-207ENST00000464435 NFATC2Q13469 925 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 LY6DQ14210 128 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 TRADDQ15628 312 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 CEBPEQ15744 281 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 ECSCRQ19T08 205 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 LDLRAP1Q5SW96 308 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 STEAP1BQ6NZ63 245 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 LRRC17Q8N6Y2 441 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 GOLGA5Q8TBA6 731 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 NABP1Q96AH0 204 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 DEFB118Q96PH6 123 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
USP25-207ENST00000464435 DCTN5Q9BTE1 182 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 LIME1Q9H400 295 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 WDR41Q9HAD4 459 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 ACTR3BQ9P1U1 418 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 PLEKHA6Q9Y2H5 1048 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 KLHDC2Q9Y2U9 406 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 RNF215Q9Y6U7 377 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 NOTCH3Q9UM47 2321 aa3.88□□□□□ -1.79
USP25-207ENST00000464435 COL2A1P02458 1487 aaPredicted RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 IGKV3D-15A0A087WSY6 115 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 IQCMA0A1B0GVH7 501 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ARHGEF33A8MVX0 844 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 MEI4A8MW99 385 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 KPNA7A9QM74 516 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 K7EQG2 157 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 FBP2O00757 339 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 CHEK1O14757 476 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 DUSP11O75319 330 aaKnown RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 ZNF883P0CG24 379 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 GHRP10912 638 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 FUT1P19526 365 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ZNF10P21506 573 aaPredicted RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 UGT1A4P22310 534 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 CHRNA3P32297 505 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ALDH3B1P43353 468 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 SSTP61278 116 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ERVK-16P61578 105 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 FKBP3Q00688 224 aaKnown RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 ITPK1Q13572 414 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 CLPPQ16740 277 aaPredicted RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 AGKQ53H12 422 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 HIST2H2AA3Q6FI13 130 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ZNF497Q6ZNH5 498 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 TMEM26Q6ZUK4 368 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 YRDCQ86U90 279 aaKnown RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 TBC1D10CQ8IV04 446 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 ZNF485Q8NCK3 441 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 PRSS33Q8NF86 280 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 OR56B1Q8NGI3 324 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 OR4F5Q8NH21 305 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 SPPL2AQ8TCT8 520 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 MIPOL1Q8TD10 442 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 DQX1Q8TE96 717 aaKnown RBP3.87□□□□□ -1.79
USP25-207ENST00000464435 TCP11Q8WWU5 503 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 TMEM45BQ96B21 275 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 RCHY1Q96PM5 261 aa3.87□□□□□ -1.79
USP25-207ENST00000464435 FTHL17Q9BXU8 183 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms