RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 IGFBP2P18065 325 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 ACVR2AP27037 513 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SERPINB3P29508 390 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 MAGEA5P43359 124 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 DNASE1L1P49184 302 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SERPINB9P50453 376 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC37A1P57057 533 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 PMPCAQ10713 525 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF267Q14586 743 aaPredicted RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC10A1Q14973 349 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 WHAMMP3Q1A5X7 153 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 MEX3BQ6ZN04 569 aaKnown RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 RNF111Q6ZNA4 994 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC29A4Q7RTT9 530 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 FBXW8Q8N3Y1 598 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 PTGR2Q8N8N7 351 aaPredicted RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 CHTF18Q8WVB6 975 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 RIT1Q92963 219 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 NTMT1Q9BV86 223 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 VPS11Q9H270 941 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 NOL11Q9H8H0 719 aaKnown RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 PNPLA3Q9NST1 481 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 TUBA8Q9NY65 449 aaPredicted RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 CNIH4Q9P003 139 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 ADAM29Q9UKF5 820 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 CSMD2Q7Z408 3487 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 INTS1Q8N201 2190 aaKnown RBP13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 EML6Q6ZMW3 1958 aa13.25□□□□□ -0.29
SNRNP40-203ENST00000463988 FOXO6A8MYZ6 492 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 OR7A17O14581 309 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 PRKRAO75569 313 aaKnown RBP13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 TOXO94900 526 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 AIFM1O95831 613 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 INHBAP08476 426 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 HOXD4P09016 255 aaPredicted RBP13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 PIGAP37287 484 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 NEK2P51955 445 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 NUP107P57740 925 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 HERVK_113P63132 956 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 ERVK-8P63133 956 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 TFF3Q07654 80 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 EBPQ15125 230 aaKnown RBP13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 TSNAXIP1Q2TAA8 658 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 FRG2Q64ET8 278 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 OR52E8Q6IFG1 317 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 TAOK1Q7L7X3 1001 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 PLD6Q8N2A8 252 aaKnown RBP13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 RPRMLQ8N4K4 120 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 MMGT1Q8N4V1 131 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 OR5M3Q8NGP4 307 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 ATP6V1E2Q96A05 226 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 TP53INP1Q96A56 240 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 SARAFQ96BY9 339 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 FRG2BQ96QU4 278 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 ERVK-6Q9BXR3 956 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 WWTR1Q9GZV5 400 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 MCCC2Q9HCC0 563 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 ZFP64Q9NPA5 681 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 KCNJ16Q9NPI9 418 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 QPCTLQ9NXS2 382 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 AHSPQ9NZD4 102 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 BOKQ9UMX3 212 aaPredicted RBP13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 ERVK-19Q9WJR5 959 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 PCDHGB3Q9Y5G1 929 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 LIPGQ9Y5X9 500 aa13.24□□□□□ -0.29
SNRNP40-203ENST00000463988 HIVEP1P15822 2718 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ATP6AP2A0A1C7CYW4 349 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ANKRD33BA6NCL7 494 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 GLOD5A6NK44 160 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 WDR1O75083 606 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ATP6AP2O75787 350 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 KRT38O76015 456 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 CNTFP26441 200 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 MAN2A2P49641 1150 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 CCNG1P51959 295 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 KCNJ2P63252 427 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 NTRK2Q16620 822 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 GGTA1PQ4G0N0 100 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 TBCELQ5QJ74 424 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 TAGAPQ8N103 731 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 LRRC25Q8N386 305 aaPredicted RBP13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF441Q8N8Z8 693 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 OR52B6Q8NGF0 335 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 OR5M9Q8NGP3 310 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 TTYH2Q9BSA4 534 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 CDC42EP4Q9H3Q1 356 aaKnown RBP13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF703Q9H7S9 590 aaPredicted RBP13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 CXorf21Q9HAI6 301 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 PROK2Q9HC23 129 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ACKR4Q9NPB9 350 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 SEMA4BQ9NPR2 832 aaPredicted RBP13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF358Q9NW07 568 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF180Q9UJW8 692 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 PCTPQ9UKL6 214 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 ACAD8Q9UKU7 415 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 CHCHD2Q9Y6H1 151 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms