RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SPATA3Q8NHX4 192 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 METTL6Q8TCB7 284 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 STON2Q8WXE9 905 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 RERGQ96A58 199 aaPredicted RBP10.4□□□□□ -0.74
SSR3-202ENST00000463503 MVB12AQ96EY5 273 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 SMIM10Q96HG1 83 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 CDK15Q96Q40 435 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 TUBB6Q9BUF5 446 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 MS4A8Q9BY19 250 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 TGIF2Q9GZN2 237 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 TNFRSF12AQ9NP84 129 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 DNAJB12Q9NXW2 375 aaKnown RBP10.4□□□□□ -0.74
SSR3-202ENST00000463503 TEKT2Q9UIF3 430 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 ZDHHC2Q9UIJ5 367 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 L3MBTL1Q9Y468 752 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 TRAF6Q9Y4K3 522 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 SLC22A7Q9Y694 548 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 ANK2Q01484 3957 aa10.4□□□□□ -0.74
SSR3-202ENST00000463503 URADA6NGE7 173 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 MANBAO00462 879 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 ULK1O75385 1050 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SEMA3DO95025 777 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 TBX6O95947 436 aaPredicted RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 SLC35G6P0C7Q6 338 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 ICAM2P13598 275 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 ZNF24P17028 368 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PRPH2P23942 346 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PTX3P26022 381 aaPredicted RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 RPL14P50914 215 aaKnown RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 FOXA1P55317 472 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 STXBP1P61764 594 aaKnown RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 MEF2AQ02078 507 aaPredicted RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 RGS1Q08116 209 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 HYAL2Q12891 473 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 FAM53BQ14153 422 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 RBBP5Q15291 538 aaKnown RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 MUM1Q2TAK8 710 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 TMEM35AQ53FP2 167 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SH2D4BQ5SQS7 431 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 DEPDC1Q5TB30 811 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PLAG1Q6DJT9 500 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SPINK14Q6IE38 97 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 CD163Q86VB7 1156 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PLD3Q8IV08 490 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SHISA5Q8N114 240 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 EID3Q8N140 333 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 AFAP1L2Q8N4X5 818 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 ZNF781Q8N8C0 355 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 TMEM178AQ8NBL3 297 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SRFBP1Q8NEF9 429 aaKnown RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 HUS1BQ8NHY5 278 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 FAM57AQ8TBR7 257 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PIWIL2Q8TC59 973 aaKnown RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 SLC13A3Q8WWT9 602 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 ASB5Q8WWX0 329 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 CMTM7Q96FZ5 175 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SERPINI1Q99574 410 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 ELOVL6Q9H5J4 265 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 CLK4Q9HAZ1 481 aaKnown RBP10.39□□□□□ -0.75
SSR3-202ENST00000463503 DMRT3Q9NQL9 472 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 PFDN4Q9NQP4 134 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 SIRT5Q9NXA8 310 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 TRPC4Q9UBN4 977 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 VTI1BQ9UEU0 232 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
SSR3-202ENST00000463503 HIVEP2P31629 2446 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 CHD3Q12873 2000 aaKnown RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 IGHV3-20A0A0C4DH32 117 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 LRIT2A6NDA9 550 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 A8MUI8 341 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 EDF1O60869 148 aaKnown RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 LYPLA1O75608 230 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 SEC24DO94855 1032 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 TGDSO95455 350 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 CHEK2O96017 543 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 PDYNP01213 254 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 HEXAP06865 529 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 ALOX15P16050 662 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 ARL1P40616 181 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 MEOX1P50221 254 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 NDUFA9Q16795 377 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 SYT16Q17RD7 645 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 TTC19Q6DKK2 380 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 TMEM214Q6NUQ4 689 aaKnown RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 LANCL3Q6ZV70 420 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 CHSY3Q70JA7 882 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 MTERF4Q7Z6M4 381 aaKnown RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 MYLK4Q86YV6 388 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 CCDC71Q8IV32 467 aaPredicted RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 CPSF7Q8N684 471 aaKnown RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 CSNK1A1LQ8N752 337 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 SELENOMQ8WWX9 145 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 GAL3ST3Q96A11 431 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 C18orf12Q96KH6 178 aa10.38□□□□□ -0.75
SSR3-202ENST00000463503 UTP23Q9BRU9 249 aaKnown RBP10.38□□□□□ -0.75
SSR3-202ENST00000463503 SIKE1Q9BRV8 207 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms