RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 MAN2A2P49641 1150 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 PNLIPRP1P54315 467 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 LSM11P83369 360 aaKnown RBP eCLIP17.5■□□□□ 0.39
HPS3-204ENST00000462030 TATDN3Q17R31 274 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 MPP7Q5T2T1 576 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 HSDL2Q6YN16 418 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 SLC30A8Q8IWU4 369 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 CPXM2Q8N436 756 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 OR52P1PQ8NH57 321 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 C1GALT1C1Q96EU7 318 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 IGSF21Q96ID5 467 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 LRR1Q96L50 414 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 DHRS1Q96LJ7 313 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 KCTD7Q96MP8 289 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 TM9SF2Q99805 663 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 DYRK1BQ9Y463 629 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 CKAP5Q14008 2032 aa17.5■□□□□ 0.39
HPS3-204ENST00000462030 KIF26AQ9ULI4 1882 aaPredicted RBP17.5■□□□□ 0.39
HPS3-204ENST00000462030 NRG2O14511 850 aaPredicted RBP17.49■□□□□ 0.39
HPS3-204ENST00000462030 C1orf105O95561 183 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 VIPR1P32241 457 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 BNC1Q01954 994 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 FAPQ12884 760 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 PIN1Q13526 163 aaPredicted RBP17.49■□□□□ 0.39
HPS3-204ENST00000462030 GPR19Q15760 415 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 ZNF628Q5EBL2 1059 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 LCN1P1Q5VSP4 162 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TPGS2Q68CL5 300 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 HTR3DQ70Z44 454 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TRIM63Q969Q1 353 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 FOPNLQ96NB1 174 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 EFCAB11Q9BUY7 163 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
HPS3-204ENST00000462030 ABCG4Q9H172 646 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 COMMD3Q9UBI1 195 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TESQ9UGI8 421 aaKnown RBP17.49■□□□□ 0.39
HPS3-204ENST00000462030 ALG5Q9Y673 324 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TRAV19A0A0A6YYK7 116 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 HLA-DMAP28067 261 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 PRLHRP49683 370 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 ACSM5Q6NUN0 579 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TMEM220Q6QAJ8 160 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 UNC5DQ6UXZ4 953 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 LAPTM4BQ86VI4 370 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 COMTD1Q86VU5 262 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TCTE3Q8IZS6 198 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 TRAM1L1Q8N609 369 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 ZFAND1Q8TCF1 268 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 MTERF3Q96E29 417 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 ZNF582Q96NG8 517 aaPredicted RBP17.49■□□□□ 0.39
HPS3-204ENST00000462030 FUZQ9BT04 418 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 ANKRA2Q9H9E1 313 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 INSL5Q9Y5Q6 135 aa17.49■□□□□ 0.39
HPS3-204ENST00000462030 DNMT3AQ9Y6K1 912 aaPredicted RBP17.49■□□□□ 0.39
HPS3-204ENST00000462030 PRRC2BQ5JSZ5 2229 aaKnown RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 B4GALT2O60909 372 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 PSKH1P11801 424 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ZNF30P17039 623 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 GJA1P17302 382 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ALAS2P22557 587 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 GABRR2P28476 465 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 MAP2K3P46734 347 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 EPHB3P54753 998 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 DCDC1P59894 354 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 P2RY14Q15391 338 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 CRTC2Q53ET0 693 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 PLET1Q6UQ28 207 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 DDX53Q86TM3 631 aaKnown RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 FAM26EQ8N5C1 309 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 IL17RCQ8NAC3 791 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 TP53I13Q8NBR0 393 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 GATAD2BQ8WXI9 593 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 WDR34Q96EX3 536 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 POLDIP3Q9BY77 421 aaKnown RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 A4GALTQ9NPC4 353 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 C5AR2Q9P296 337 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 SF3B6Q9Y3B4 125 aaKnown RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 CLCA3PQ9Y6N3 262 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 MTCL1Q9Y4B5 1905 aaKnown RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 A0A1W2PQ45 241 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 A0A1W2PQY0 241 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ANHXE9PGG2 379 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 HOXA2O43364 376 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ZNF780AO75290 641 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 NME6O75414 186 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 CPN2P22792 545 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 GAS1P54826 345 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 WNT4P56705 351 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 POLR2LP62875 67 aaKnown RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 TMEM115Q12893 351 aaPredicted RBP17.48■□□□□ 0.39
HPS3-204ENST00000462030 GINS1Q14691 196 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 PLK5Q496M5 336 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ZNF730Q6ZMV8 503 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 GAREM2Q75VX8 874 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 ZFP41Q8N8Y5 198 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 OR2A12Q8NGT7 310 aa17.48■□□□□ 0.39
HPS3-204ENST00000462030 KIAA1143Q96AT1 154 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms