RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 PRR30Q53SZ7 412 aaPredicted RBP18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 NOXRED1Q6NXP6 359 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 TUBA3EQ6PEY2 450 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 HSDL2Q6YN16 418 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 MGARPQ8TDB4 240 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 FBXL20Q96IG2 436 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 ART5Q96L15 291 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 CNPPD1Q9BV87 410 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 PSME2Q9UL46 239 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 ZNF462Q96JM2 2506 aa18.65■□□□□ 0.58
SNAPC3-204ENST00000461041 TRAV17A0A0B4J275 112 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 TMEM200CA6NKL6 621 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 ERAL1O75616 437 aaKnown RBP18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 IGKV3-11P04433 115 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 PORP16435 677 aaPredicted RBP18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 CD96P40200 585 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 ERVK-8P63133 956 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 ZNF267Q14586 743 aaPredicted RBP18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 HEPACAMQ14CZ8 416 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 OR8K3Q8NH51 312 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 CDC26Q8NHZ8 85 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 CPT1CQ8TCG5 803 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 KLHL29Q96CT2 875 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 UTP23Q9BRU9 249 aaKnown RBP18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 C20orf27Q9GZN8 174 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 CXorf21Q9HAI6 301 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 ANKRD10Q9NXR5 420 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 NKIRAS1Q9NYS0 192 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 ERVK-19Q9WJR5 959 aa18.64■□□□□ 0.57
SNAPC3-204ENST00000461041 PYCARD-AS1I3L0S3 204 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 J3QKU1 62 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 CDK2AP1O14519 115 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 FCHO1O14526 889 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 LSM1O15116 133 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 CSNK2A2P19784 350 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 FEN1P39748 380 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 SLC1A6P48664 564 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 RNF4P78317 190 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 STX3Q13277 289 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 INPP5JQ15735 1006 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 ZNF468Q5VIY5 522 aaPredicted RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 FAM180BQ6P0A1 224 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 CISD2Q8N5K1 135 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 ZNF781Q8N8C0 355 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 SUN3Q8TAQ9 357 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 FCRL1Q96LA6 429 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 SIGLEC12Q96PQ1 595 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 VIPAS39Q9H9C1 493 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 LIN28AQ9H9Z2 209 aaKnown RBP18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 MYNNQ9NPC7 610 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 UTS2RQ9UKP6 389 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 ZNF780BQ9Y6R6 833 aa18.63■□□□□ 0.57
SNAPC3-204ENST00000461041 PRAMEF2O60811 474 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 SKAP2O75563 359 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 ITGA10O75578 1167 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 CT62P0C5K7 136 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 NT5EP21589 574 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 RPL38P63173 70 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 OC90Q02509 493 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 DUSP2Q05923 314 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 C2orf80Q0P641 193 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 BST1Q10588 318 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 OR1C1Q15619 314 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 GALNTL6Q49A17 601 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 RFTN2Q52LD8 501 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 XKR7Q5GH72 579 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 FAM71E1Q6IPT2 247 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 C16orf47Q6ZP98 133 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 GALNT12Q8IXK2 581 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 MDS2Q8NDY4 140 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 EXOSC8Q96B26 276 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 SNRNP40Q96DI7 357 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 CNRIP1Q96F85 164 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 ATP6V1G3Q96LB4 118 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 ZNF681Q96N22 645 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 SORT1Q99523 831 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 MYOTQ9UBF9 498 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 WBP11Q9Y2W2 641 aaKnown RBP18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 RAP2CQ9Y3L5 183 aa18.62■□□□□ 0.57
SNAPC3-204ENST00000461041 WWP2O00308 870 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 OR2J2O76002 312 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 SNUPNO95149 360 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 ATP1B1P05026 303 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 DDCP20711 480 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 TACR1P25103 407 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 TRHRP34981 398 aaPredicted RBP18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 HK2P52789 917 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 FOXK1P85037 733 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 IGFBP7Q16270 282 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 C6orf163Q5TEZ5 329 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 SPINK14Q6IE38 97 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 RPUSD3Q6P087 351 aaKnown RBP18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 RNF111Q6ZNA4 994 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 C9orf40Q8IXQ3 194 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 LRRC25Q8N386 305 aaPredicted RBP18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 OR5L2Q8NGL0 311 aa18.61■□□□□ 0.57
SNAPC3-204ENST00000461041 MIB2Q96AX9 1013 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms