RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 WBP11Q9Y2W2 641 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 LRRK2Q5S007 2527 aa12.35□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SPENQ96T58 3664 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 GLOD5A6NK44 160 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CYSRT1A8MQ03 144 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PGRMC2O15173 223 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FGF17O60258 216 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 AIFM1O95831 613 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ANXA4P09525 319 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DRD2P14416 443 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ALOX15P16050 662 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TIA1P31483 386 aaKnown RBP eCLIP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 STT3AP46977 705 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 SLC1A6P48664 564 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CLCN2P51788 898 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CASP6P55212 293 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PLIN5Q00G26 463 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ID2Q02363 134 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 FOLH1Q04609 750 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 HEPACAMQ14CZ8 416 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ZNF766Q5HY98 468 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 H3F3CQ6NXT2 135 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 GFRALQ6UXV0 394 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 OR4N5Q8IXE1 308 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 LGI4Q8N135 537 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 BEST3Q8N1M1 668 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TMEM178AQ8NBL3 297 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MORN4Q8NDC4 146 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 MGARPQ8TDB4 240 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ELP5Q8TE02 316 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ARL8AQ96BM9 186 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 VMP1Q96GC9 406 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ART5Q96L15 291 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DEFB126Q9BYW3 111 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 LRTM1Q9HBL6 345 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TNFRSF12AQ9NP84 129 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 C1orf109Q9NX04 203 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 TEX10Q9NXF1 929 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 ZDHHC2Q9UIJ5 367 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PCDHGB6Q9Y5F9 930 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 CLDN16Q9Y5I7 305 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
RAB11FIP3-207ENST00000461009 PRRC2CQ9Y520 2896 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MYOCOSA0A1B0GUC4 107 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 HMGB1P1B2RPK0 211 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 C17orf105B2RV13 164 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 NPIPB8E9PQR5 432 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TGFBR3LH3BV60 316 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR10H2O60403 315 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 LINC00032P0C843 101 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC35E2P0CK97 266 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 BGNP21810 368 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PRPH2P23942 346 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 GALNSP34059 522 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 UGT3A2Q3SY77 523 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 C6orf163Q5TEZ5 329 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ST13P4Q8IZP2 240 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 AGR3Q8TD06 166 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 C16orf78Q8WTQ4 265 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TWIST2Q8WVJ9 160 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SUCOQ9UBS9 1254 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 COPS7AQ9UBW8 275 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SEC14L3Q9UDX4 400 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PPIEQ9UNP9 301 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 DLGAP4Q9Y2H0 992 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TMED5Q9Y3A6 229 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RAP2CQ9Y3L5 183 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF780BQ9Y6R6 833 aa12.33□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FCHO1O14526 889 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PRKRAO75569 313 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZFAND5O76080 213 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 STSP08842 583 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PORP16435 677 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ALDH9A1P49189 494 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RPL14P50914 215 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 XKP51811 444 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 WDR4P57081 412 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RAE1P78406 368 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF763Q0D2J5 394 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TUBA3CQ13748 450 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR1C1Q15619 314 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF324BQ6AW86 544 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FCRLBQ6BAA4 426 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC48A1Q6P1K1 146 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MTFR2Q6P444 385 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TUBA3EQ6PEY2 450 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RPS19BP1Q86WX3 136 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SAMD14Q8IZD0 417 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR5L2Q8NGL0 311 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 NCLNQ969V3 563 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms