RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CA5AP35218 305 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 FRKP42685 505 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 CAMLGP49069 296 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 NKX2-5P52952 324 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 GRM2Q14416 872 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 FNDC3BQ53EP0 1204 aaKnown RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 RTP2Q5QGT7 225 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 SERPINA9Q86WD7 417 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 PHYKPLQ8IUZ5 450 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ELP5Q8TE02 316 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 GTF2H4Q92759 462 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 SFXN1Q9H9B4 322 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 WASH6PQ9NQA3 447 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CYP17A1P05093 508 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CDK1P06493 297 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ZDHHC11BP0C7U3 371 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 HSD3B1P14060 373 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CSNK2A2P19784 350 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 SLC2A5P22732 501 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 HSD3B2P26439 372 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CD34P28906 385 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 TPMTP51580 245 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 DLX5P56178 289 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ABRAXAS2Q15018 415 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 SMARCD3Q6STE5 483 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 C16orf59Q7L2K0 433 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 TCEANCQ8N8B7 351 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 MRPL43Q8N983 215 aaKnown RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 SMAP2Q8WU79 429 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 COQ8BQ96D53 544 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ELMOD3Q96FG2 381 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 GDF15Q99988 308 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 BEX2Q9BXY8 128 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 GLTPQ9NZD2 209 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 TMEM14AQ9Y6G1 99 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 COLEC10Q9Y6Z7 277 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 TVP23AA6NH52 213 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 PHYHO14832 338 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 GRM6O15303 877 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 SCGB1D2O95969 90 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 PDGFAP04085 211 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 PROS1P07225 676 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CD48P09326 243 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 RHCEP18577 417 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 GGT1P19440 569 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 MLLT3P42568 568 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 RAB8AP61006 207 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 HERV-K104P61576 105 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 RCAN2Q14206 197 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CDK10Q15131 360 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 UGT3A2Q3SY77 523 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 AVPI1Q5T686 147 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 SSX9Q7RTT3 188 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 ZNF366Q8N895 744 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 COX18Q8N8Q8 333 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 OSBPL2Q9H1P3 480 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 RSPH9Q9H1X1 276 aaPredicted RBP9.35□□□□□ -0.91
UFD1-205ENST00000459854 SLC38A1Q9H2H9 487 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 CWH43Q9H720 699 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
UFD1-205ENST00000459854 SLC22A31A6NKX4 558 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 S100A8P05109 93 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 CSF1P09603 554 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 ENDOUP21128 410 aaKnown RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 ALDH3B1P43353 468 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 C1orf220Q5T0J3 134 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 DGLUCYQ7Z3D6 616 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 NXPE1Q8N323 547 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 METTL4Q8N3J2 472 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 OR6K6Q8NGW6 343 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 ADAMTS16Q8TE57 1224 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 MRPL38Q96DV4 380 aaKnown RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 AIG1Q9NVV5 245 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 INTS6Q9UL03 887 aaKnown RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 MTMR11A4FU01 709 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 TUBAL3A6NHL2 446 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 ELFN1P0C7U0 828 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 HAPLN1P10915 354 aaPredicted RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 HDCP19113 662 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 TUBG1P23258 451 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 PTBP1P26599 531 aaKnown RBP eCLIP9.34□□□□□ -0.91
UFD1-205ENST00000459854 HTR1BP28222 390 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 ART1P52961 327 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 ZNF33BQ06732 778 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 NIPAL4Q0D2K0 466 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 HSPB3Q12988 150 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 GTF2IRD2BQ6EKJ0 949 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 GTF2IRD2Q86UP8 949 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 OSTM1Q86WC4 334 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 PYROXD2Q8N2H3 581 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 SIDT2Q8NBJ9 832 aaKnown RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 C2CD4AQ8NCU7 369 aaPredicted RBP9.34□□□□□ -0.91
UFD1-205ENST00000459854 EBPLQ9BY08 206 aa9.34□□□□□ -0.91
UFD1-205ENST00000459854 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms