RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 APMAPQ9HDC9 416 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 FBXW2Q9UKT8 454 aa9.76□□□□□ -0.85
USP39-210ENST00000459775 SCN3AQ9NY46 2000 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 A0A0A6YYC8 382 aaPredicted RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 MYOCOSA0A1B0GUC4 107 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SPAARA0A1B0GVQ0 90 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 A0A1W2PS29 197 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 ASPDHA6ND91 283 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 OR2W5A6NFC9 320 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 I3L1I5 382 aaPredicted RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 FBP2O00757 339 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 MAGEB3O15480 346 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 DNAJC8O75937 253 aaPredicted RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 TIAF1O95411 115 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 C1QCP02747 245 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 IL3P08700 152 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SLC35G6P0C7Q6 338 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 COX4I1P13073 169 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 ATP5A1P25705 553 aaKnown RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 STX1BP61266 288 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 FOXM1Q08050 763 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 RGS1Q08116 209 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SLAMF1Q13291 335 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SLC14A1Q13336 389 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SPIDRQ14159 915 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SYT16Q17RD7 645 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 PGS1Q32NB8 556 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 TIGD2Q4W5G0 525 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SPIN4Q56A73 249 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SPANXN4Q5MJ08 99 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 C18orf63Q68DL7 685 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 AAGABQ6PD74 315 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 DHRS13Q6UX07 377 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SLCO6A1Q86UG4 719 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 RETREG3Q86VR2 466 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 D2HGDHQ8N465 521 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 ARHGEF39Q8N4T4 335 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 ACOT4Q8N9L9 421 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 PLPP7Q8NBV4 271 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 TTLQ8NG68 377 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 OR4D9Q8NGE8 314 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 OR9A4Q8NGU2 314 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 NT5CQ8TCD5 201 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 C16orf78Q8WTQ4 265 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 KLHL6Q8WZ60 621 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SLC41A2Q96JW4 573 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 FCRL1Q96LA6 429 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 C10orf90Q96M02 699 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 CD180Q99467 661 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 SLAMF8Q9P0V8 285 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 DHCR7Q9UBM7 475 aaKnown RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 PLCL2Q9UPR0 1127 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 NAALAD2Q9Y3Q0 740 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 ATG4BQ9Y4P1 393 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 TMEM184BQ9Y519 407 aaPredicted RBP9.75□□□□□ -0.85
USP39-210ENST00000459775 PCDHGB5Q9Y5G0 923 aa9.75□□□□□ -0.85
USP39-210ENST00000459775 NPIPB8E9PQR5 432 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 FAM227AF5H4B4 570 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 H3BMH7 237 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 AIM2O14862 343 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 CCL4P13236 92 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 PORP16435 677 aaPredicted RBP9.74□□□□□ -0.85
USP39-210ENST00000459775 ALOX12P18054 663 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 MAPK12P53778 367 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 MTTPP55157 894 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 MAT1AQ00266 395 aaKnown RBP9.74□□□□□ -0.85
USP39-210ENST00000459775 ZNF33BQ06732 778 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 KLC1Q07866 573 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 PWP1Q13610 501 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 RUNX2Q13950 521 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 NCF4Q15080 339 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 GSTA3Q16772 222 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 FAM174BQ3ZCQ3 159 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 ZNF385BQ569K4 471 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 GPR139Q6DWJ6 353 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 SHQ1Q6PI26 577 aaKnown RBP9.74□□□□□ -0.85
USP39-210ENST00000459775 PRSS42Q7Z5A4 293 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 ANKRD46Q86W74 232 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 KIF2BQ8N4N8 673 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 TM4SF18Q96CE8 201 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 RCN3Q96D15 328 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 TMEM74Q96NL1 305 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 OR6C1Q96RD1 312 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 MAPKAP1Q9BPZ7 522 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 RBCK1Q9BYM8 510 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 DPY30Q9C005 99 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 EPB41L1Q9H4G0 881 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 ZNF768Q9H5H4 540 aaKnown RBP9.74□□□□□ -0.85
USP39-210ENST00000459775 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 SLC52A3Q9NQ40 469 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 PLSCR4Q9NRQ2 329 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 INIPQ9NRY2 104 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 FGF21Q9NSA1 209 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 NMRK1Q9NWW6 199 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 MAU2Q9Y6X3 613 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 A0A0A6YYD5 115 aa9.74□□□□□ -0.85
USP39-210ENST00000459775 A0A1W2PR48 441 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms