RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ST6GALNAC3Q8NDV1 305 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 OR5L2Q8NGL0 311 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 RIT1Q92963 219 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 SLX1AQ9BQ83 275 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 ERVK-19Q9WJR5 959 aa19.26■□□□□ 0.67
VARS-218ENST00000459667 ANKUB1A6NFN9 424 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 WWP2O00308 870 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 OR2J2O76002 312 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 CRYABP02511 175 aaKnown RBP19.25■□□□□ 0.67
VARS-218ENST00000459667 EDN3P14138 238 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 ALDH9A1P49189 494 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 XKP51811 444 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 PMP22Q01453 160 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 GALNTL5Q7Z4T8 443 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 EXOC3L1Q86VI1 746 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 ZNF227Q86WZ6 799 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 GALNT12Q8IXK2 581 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 C9orf40Q8IXQ3 194 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 CYP4Z2PQ8N1L4 340 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 NR4A3Q92570 626 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 TMEM125Q96AQ2 219 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 EBPLQ9BY08 206 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.25■□□□□ 0.67
VARS-218ENST00000459667 CES1P1Q9UKY3 287 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 FIS1Q9Y3D6 152 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 ESPL1Q14674 2120 aa19.25■□□□□ 0.67
VARS-218ENST00000459667 AZIN1O14977 448 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 TM9SF1O15321 606 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 NME2P1O60361 137 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 NPHS1O60500 1241 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 ERAL1O75616 437 aaKnown RBP19.24■□□□□ 0.67
VARS-218ENST00000459667 IL3P08700 152 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 CPMP14384 443 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 NME2P22392 152 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 MAPKAPK3Q16644 382 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 EIF2S3LQ2VIR3 472 aaKnown RBP19.24■□□□□ 0.67
VARS-218ENST00000459667 ZNF324BQ6AW86 544 aaPredicted RBP19.24■□□□□ 0.67
VARS-218ENST00000459667 GALNT18Q6P9A2 607 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 RNF111Q6ZNA4 994 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 TRIM46Q7Z4K8 759 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 FAM98AQ8NCA5 519 aaKnown RBP19.24■□□□□ 0.67
VARS-218ENST00000459667 DNAJB8Q8NHS0 232 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 ASB15Q8WXK1 588 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 ZBTB9Q96C00 473 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 KLHL29Q96CT2 875 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 C11orf24Q96F05 449 aaPredicted RBP19.24■□□□□ 0.67
VARS-218ENST00000459667 RASL10BQ96S79 203 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 KCNK9Q9NPC2 374 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 SIRT5Q9NXA8 310 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 PSME2Q9UL46 239 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 DLGAP4Q9Y2H0 992 aa19.24■□□□□ 0.67
VARS-218ENST00000459667 A8MVJ9 347 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 RSL1D1O76021 490 aaKnown RBP19.23■□□□□ 0.67
VARS-218ENST00000459667 ZWINTO95229 277 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 CHRNGP07510 517 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 PORP16435 677 aaPredicted RBP19.23■□□□□ 0.67
VARS-218ENST00000459667 ETV4P43268 484 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 CASP8Q14790 479 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 ZNF750Q32MQ0 723 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 TNFAIP8L3Q5GJ75 292 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 C6orf163Q5TEZ5 329 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 ZCCHC23Q6ZST2 131 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 GPALPP1Q8IXQ4 340 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 FAM26EQ8N5C1 309 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 NUBPLQ8TB37 319 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 PRR7Q8TB68 274 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 C16orf78Q8WTQ4 265 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 CXorf21Q9HAI6 301 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 EML4Q9HC35 981 aaKnown RBP19.23■□□□□ 0.67
VARS-218ENST00000459667 HPF1Q9NWY4 346 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 HEY2Q9UBP5 337 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 ERVK-11Q9UQG0 969 aa19.23■□□□□ 0.67
VARS-218ENST00000459667 RELNP78509 3460 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 CLEC18AA5D8T8 446 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 ASPDHA6ND91 283 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 OR6B1O95007 311 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 CHEK2O96017 543 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 BPGMP07738 259 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 ANXA4P09525 319 aaPredicted RBP19.22■□□□□ 0.67
VARS-218ENST00000459667 NT5EP21589 574 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 SERPINB5P36952 375 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 FEN1P39748 380 aaKnown RBP19.22■□□□□ 0.67
VARS-218ENST00000459667 SOX3P41225 446 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 GSTM5P46439 218 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 TDGF1P3P51864 188 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 SLC37A1P57057 533 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 SRSF11Q05519 484 aaKnown RBP19.22■□□□□ 0.67
VARS-218ENST00000459667 SRSF1Q07955 248 aaKnown RBP eCLIP19.22■□□□□ 0.67
VARS-218ENST00000459667 ARL13AQ5H913 290 aaPredicted RBP19.22■□□□□ 0.67
VARS-218ENST00000459667 FHL5Q5TD97 284 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 KANK2Q63ZY3 851 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 CLEC18BQ6UXF7 455 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 SLC29A4Q7RTT9 530 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 CLEC18CQ8NCF0 446 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 PPP1R14CQ8TAE6 165 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 GAL3ST4Q96RP7 486 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 UTS2RQ9UKP6 389 aa19.22■□□□□ 0.67
VARS-218ENST00000459667 KLF13Q9Y2Y9 288 aaPredicted RBP19.22■□□□□ 0.67
VARS-218ENST00000459667 POLR3HQ9Y535 204 aaPredicted RBP19.22■□□□□ 0.67
VARS-218ENST00000459667 PTGDR2Q9Y5Y4 395 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms