RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 REEP3Q6NUK4 255 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 DLEU7Q6UYE1 221 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CYP2R1Q6VVX0 501 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 TMEM64Q6YI46 380 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 DBX2Q6ZNG2 339 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RAB11FIP2Q7L804 512 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ZNF551Q7Z340 670 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 KANSL1Q7Z3B3 1105 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 C6orf120Q7Z4R8 191 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ARHGAP22Q7Z5H3 698 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RETREG3Q86VR2 466 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CYP4Z1Q86W10 505 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SPPL2CQ8IUH8 684 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC44A2Q8IWA5 706 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 GALNT12Q8IXK2 581 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ST13P4Q8IZP2 240 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CLECL1Q8IZS7 167 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CA13Q8N1Q1 262 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 GALNT15Q8N3T1 639 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 RCBTB1Q8NDN9 531 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 NUP43Q8NFH3 380 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR5AK3PQ8NH89 298 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 WDR36Q8NI36 951 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PNPT1Q8TCS8 783 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SPPL2AQ8TCT8 520 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PROX1Q92786 737 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 MR1Q95460 341 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 TCEAL3Q969E4 200 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 TMEM125Q96AQ2 219 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CIDECQ96AQ7 238 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 FKBP10Q96AY3 582 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 OTUB1Q96FW1 271 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SMIM10Q96HG1 83 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 CLPTM1LQ96KA5 538 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 AMDHD1Q96NU7 426 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 MS4A4EQ96PG1 132 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 TAAR9Q96RI9 348 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC39A3Q9BRY0 314 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 INPP5KQ9BT40 448 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 G6PC3Q9BUM1 346 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 COL25A1Q9BXS0 654 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ACTRT3Q9BYD9 372 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PAIP1Q9H074 479 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 Q9H521 79 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 HHATLQ9HCP6 504 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PNO1Q9NRX1 252 aaKnown RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 WDR70Q9NW82 654 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 VAPAQ9P0L0 249 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 C6orf203Q9P0P8 240 aaPredicted RBP5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 HCN3Q9P1Z3 774 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 SEMA5BQ9P283 1151 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ABCD2Q9UBJ2 740 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 PRODH2Q9UF12 536 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 EGFL7Q9UHF1 273 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ANAPC2Q9UJX6 822 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 MKL2Q9ULH7 1088 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR10H1Q9Y4A9 318 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 ORC6Q9Y5N6 252 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 MAU2Q9Y6X3 613 aa5.5□□□□□ -1.53
RNU1-88P-201ENST00000459274 A0A087WV62 115 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CCDC187A0A096LP49 1063 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 A0A1W2PQM1 296 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 DHRS12A0PJE2 317 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 MYO1GB0I1T2 1018 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 B4E171 279 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 AGRPO00253 132 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 NME4O00746 187 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ARPC2O15144 300 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PGRMC2O15173 223 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 P2RX6O15547 441 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SLC28A2O43868 658 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 HS6ST1O60243 411 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 MGRN1O60291 552 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PRAMEF10O60809 474 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 LDB3O75112 727 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ENTPD5O75356 428 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 DEAF1O75398 565 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 E2F6O75461 281 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CREG1O75629 220 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CDC123O75794 336 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PSMG1O95456 288 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ATP6V1G2O95670 118 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ALBP02768 609 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 ATP1B1P05026 303 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CYC1P08574 325 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 FGF5P12034 268 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 EFNA1P20827 205 aaPredicted RBP5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CCKBRP32239 447 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 CSF2RBP32927 897 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 GALNSP34059 522 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 SOX11P35716 441 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 NBL1P41271 181 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 TSPAN7P41732 249 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 OR1D4P47884 311 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PGDP52209 483 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 NRG3P56975 720 aa5.49□□□□□ -1.53
RNU1-88P-201ENST00000459274 PCBP4P57723 403 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms