RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CNPPD1Q9BV87 410 aa15.02■□□□□ -0
CD28-203ENST00000458610 ASF1BQ9NVP2 202 aa15.02■□□□□ -0
CD28-203ENST00000458610 C1orf109Q9NX04 203 aa15.02■□□□□ -0
CD28-203ENST00000458610 EHD3Q9NZN3 535 aa15.02■□□□□ -0
CD28-203ENST00000458610 ZNF223Q9UK11 482 aaPredicted RBP15.02■□□□□ -0
CD28-203ENST00000458610 CES1P1Q9UKY3 287 aa15.02■□□□□ -0
CD28-203ENST00000458610 FIS1Q9Y3D6 152 aa15.02■□□□□ -0
CD28-203ENST00000458610 WASHC1A8K0Z3 465 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 TMEM114B3SHH9 223 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 HSPA4LO95757 839 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 SERPINE1P05121 402 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 SP1P08047 785 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 NT5EP21589 574 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 SLC18A1P54219 525 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 RAE1P78406 368 aaKnown RBP15.01□□□□□ -0.01
CD28-203ENST00000458610 ZNF763Q0D2J5 394 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 ELOAQ14241 798 aaKnown RBP15.01□□□□□ -0.01
CD28-203ENST00000458610 CASP8Q14790 479 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 MPEG1Q2M385 716 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 SH2D4BQ5SQS7 431 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 SPINK14Q6IE38 97 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 OPN5Q6U736 354 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 RNF111Q6ZNA4 994 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 ZCCHC23Q6ZST2 131 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 SLC15A4Q8N697 577 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 MDS2Q8NDY4 140 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 OR7G1Q8NGA0 311 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 FAR1Q8WVX9 515 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 KLHL29Q96CT2 875 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 C11orf24Q96F05 449 aaPredicted RBP15.01□□□□□ -0.01
CD28-203ENST00000458610 CLMPQ9H6B4 373 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 CXorf21Q9HAI6 301 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 LRTM1Q9HBL6 345 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 ANKRD10Q9NXR5 420 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 UTS2RQ9UKP6 389 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 ERVK-11Q9UQG0 969 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 CFL2Q9Y281 166 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.01□□□□□ -0.01
CD28-203ENST00000458610 TMED5Q9Y3A6 229 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 DNAJC15Q9Y5T4 150 aa15.01□□□□□ -0.01
CD28-203ENST00000458610 CNTRLQ7Z7A1 2325 aa15□□□□□ -0.01
CD28-203ENST00000458610 WDR91A4D1P6 747 aa15□□□□□ -0.01
CD28-203ENST00000458610 A8MVJ9 347 aa15□□□□□ -0.01
CD28-203ENST00000458610 KALRNO60229 2985 aa15□□□□□ -0.01
CD28-203ENST00000458610 MAN1A2O60476 641 aa15□□□□□ -0.01
CD28-203ENST00000458610 IGKV3-11P04433 115 aa15□□□□□ -0.01
CD28-203ENST00000458610 CHRNGP07510 517 aa15□□□□□ -0.01
CD28-203ENST00000458610 IL3P08700 152 aa15□□□□□ -0.01
CD28-203ENST00000458610 ERVK-8P63133 956 aa15□□□□□ -0.01
CD28-203ENST00000458610 C2orf80Q0P641 193 aa15□□□□□ -0.01
CD28-203ENST00000458610 HLA-DQA1Q5Y7H0 255 aa15□□□□□ -0.01
CD28-203ENST00000458610 NOXRED1Q6NXP6 359 aa15□□□□□ -0.01
CD28-203ENST00000458610 IKBIPQ70UQ0 350 aa15□□□□□ -0.01
CD28-203ENST00000458610 DDIASQ8IXT1 998 aa15□□□□□ -0.01
CD28-203ENST00000458610 LRRC25Q8N386 305 aaPredicted RBP15□□□□□ -0.01
CD28-203ENST00000458610 OR6Y1Q8NGX8 325 aa15□□□□□ -0.01
CD28-203ENST00000458610 SLC22A8Q8TCC7 542 aa15□□□□□ -0.01
CD28-203ENST00000458610 GRHL3Q8TE85 626 aa15□□□□□ -0.01
CD28-203ENST00000458610 ASB15Q8WXK1 588 aa15□□□□□ -0.01
CD28-203ENST00000458610 UCN3Q969E3 161 aa15□□□□□ -0.01
CD28-203ENST00000458610 C19orf60Q96EN9 201 aa15□□□□□ -0.01
CD28-203ENST00000458610 SCMH1Q96GD3 660 aa15□□□□□ -0.01
CD28-203ENST00000458610 PPP3R2Q96LZ3 170 aa15□□□□□ -0.01
CD28-203ENST00000458610 BARD1Q99728 777 aaKnown RBP15□□□□□ -0.01
CD28-203ENST00000458610 TMBIM4Q9HC24 238 aa15□□□□□ -0.01
CD28-203ENST00000458610 TNFRSF12AQ9NP84 129 aa15□□□□□ -0.01
CD28-203ENST00000458610 TIMMDC1Q9NPL8 285 aa15□□□□□ -0.01
CD28-203ENST00000458610 MIEF1Q9NQG6 463 aa15□□□□□ -0.01
CD28-203ENST00000458610 OLAHQ9NV23 265 aa15□□□□□ -0.01
CD28-203ENST00000458610 HPF1Q9NWY4 346 aa15□□□□□ -0.01
CD28-203ENST00000458610 NKIRAS1Q9NYS0 192 aa15□□□□□ -0.01
CD28-203ENST00000458610 ERVK-19Q9WJR5 959 aa15□□□□□ -0.01
CD28-203ENST00000458610 ENTPD4Q9Y227 616 aa15□□□□□ -0.01
CD28-203ENST00000458610 KLRC4-KLRK1H3BQV0 150 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 WWP2O00308 870 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 SLC25A12O75746 678 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 BCAS2O75934 225 aaPredicted RBP14.99□□□□□ -0.01
CD28-203ENST00000458610 OR2J2O76002 312 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 ATP1B1P05026 303 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 LINC00032P0C843 101 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 DHRS4L1P0CG22 281 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 DDX5P17844 614 aaKnown RBP14.99□□□□□ -0.01
CD28-203ENST00000458610 MAPK1P28482 360 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 MPIP34949 423 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 FEN1P39748 380 aaKnown RBP14.99□□□□□ -0.01
CD28-203ENST00000458610 HK2P52789 917 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 FUT7Q11130 342 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 MAP4K2Q12851 820 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 NR6A1Q15406 480 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 CHI3L2Q15782 390 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 MAPKAPK3Q16644 382 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 PRR30Q53SZ7 412 aaPredicted RBP14.99□□□□□ -0.01
CD28-203ENST00000458610 DGAT2L6Q6ZPD8 337 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 DND1Q8IYX4 353 aaKnown RBP14.99□□□□□ -0.01
CD28-203ENST00000458610 CYP4Z2PQ8N1L4 340 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 ZNF321PQ8N8H1 164 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 TWIST2Q8WVJ9 160 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 SGCZQ96LD1 299 aa14.99□□□□□ -0.01
CD28-203ENST00000458610 SIGLEC12Q96PQ1 595 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms