RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NDOR1Q9UHB4 597 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLCO3A1Q9UIG8 710 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 POU2F3Q9UKI9 436 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ACSL6Q9UKU0 697 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SATB2Q9UPW6 733 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CLCA2Q9UQC9 943 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ENTPD4Q9Y227 616 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 ITM2BQ9Y287 266 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 LSM2Q9Y333 95 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 SPIN1Q9Y657 262 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 CFAP20Q9Y6A4 193 aaKnown RBP3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 DSPPQ9NZW4 1301 aa3.17□□□□□ -1.9
HMGN1P18-201ENST00000457642 OBSL1O75147 1896 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A0G2JPF8 293 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRBV4-1A0A0J9YWV2 114 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 EDDM13A0A1B0GTR0 161 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM240BA0A1B0GVZ2 78 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A1W2PQ09 198 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A1W2PRQ8 180 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 A0A1W2PRU2 124 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MEIOCA2RUB1 952 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GSAPA4D1B5 854 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FAM170BA6NMN3 283 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HNRNPCL2B2RXH8 293 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HNRNPCL3B7ZW38 293 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 C1QTNF3-AMACRE9PGA6 284 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ANHXE9PGG2 379 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 H3BQ06 376 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 J3KTA2 159 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 M0R129 80 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SAP18O00422 153 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SYT5O00445 386 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 KPNA3O00505 521 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CTDSP2O14595 271 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 AP3D1O14617 1153 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TFECO14948 347 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 POLR1CO15160 346 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 YY2O15391 372 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TEX28O15482 410 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRODHO43272 600 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TLX2O43763 284 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TPST2O60704 377 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PQBP1O60828 265 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GCM2O75603 506 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CYP7B1O75881 506 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 UBXN7O94888 489 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SOX14O95416 240 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 AGR2O95994 175 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADH1CP00326 375 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 DNTTP04053 509 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HLA-DPB1P04440 258 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CYP17A1P05093 508 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HMGN1P05114 100 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ALPPP05187 535 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 C8AP07357 584 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC35G4P0C7Q5 338 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCNYL3P0C7X3 344 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HNRNPCL4P0DMR1 293 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ACP2P11117 423 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SLC2A2P11168 524 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CKMT1AP12532 417 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TYRP14679 529 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 NPPBP16860 134 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CPEP16870 476 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CPN2P22792 545 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TCEA1P23193 301 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 HLA-FP30511 346 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GRK5P34947 590 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 RPS19P39019 145 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 BUD31P41223 144 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SOX3P41225 446 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 STAT5AP42229 794 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SSR2P43308 183 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MAP2K3P46734 347 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 KCNJ5P48544 419 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 VASPP50552 380 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 NKX2-5P52952 324 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MVDP53602 400 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CTSCP53634 463 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CRYBA2P53672 197 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CASP9P55211 416 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 CCL23P55773 120 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TAS2R41P59536 307 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GNG2P59768 71 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ARPC4P59998 168 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 PRR5P85299 388 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 REEP5Q00765 189 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MC1RQ01726 317 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MXD1Q05195 221 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 DMPKQ09013 629 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 FOXD4Q12950 439 aaPredicted RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 ADAM15Q13444 863 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 IL18Q14116 193 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 GINS1Q14691 196 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRAM2Q15035 370 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 MLC1Q15049 377 aa3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SF3B4Q15427 424 aaKnown RBP eCLIP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 SF3A2Q15428 464 aaKnown RBP3.16□□□□□ -1.9
HMGN1P18-201ENST00000457642 TRAM1Q15629 374 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms