RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 BTKQ06187 659 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 PCLAFQ15004 111 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 MPEG1Q2M385 716 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 SLC48A1Q6P1K1 146 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 GALNTL5Q7Z4T8 443 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 GALNT12Q8IXK2 581 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 POGLUT1Q8NBL1 392 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 SLC22A8Q8TCC7 542 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 METTL2AQ96IZ6 378 aaKnown RBP21.52■■□□□ 1.04
CBX3-204ENST00000456948 TAAR6Q96RI8 345 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 CENPHQ9H3R5 247 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 GIMAP4Q9NUV9 329 aa21.52■■□□□ 1.04
CBX3-204ENST00000456948 COL12A1Q99715 3063 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 WWP2O00308 870 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 SLC28A1O00337 649 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 CTIFO43310 598 aaKnown RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 NME2P1O60361 137 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 NPHS1O60500 1241 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 ERAL1O75616 437 aaKnown RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 CPMP14384 443 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 NT5EP21589 574 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 NME2P22392 152 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 SERPINB5P36952 375 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 HK2P52789 917 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 ERVK-8P63133 956 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 HMGCS1Q01581 520 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 ALDH6A1Q02252 535 aaKnown RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 RBPJQ06330 500 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 ZNF468Q5VIY5 522 aaPredicted RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 HLA-DQA1Q5Y7H0 255 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 TRIM46Q7Z4K8 759 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 SLC15A4Q8N697 577 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 FAM76AQ8TAV0 307 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 KLHL29Q96CT2 875 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 SGCZQ96LD1 299 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 GATA5Q9BWX5 397 aaPredicted RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 SHCBP1LQ9BZQ2 653 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 STMN4Q9H169 189 aaPredicted RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 ERVK-19Q9WJR5 959 aa21.51■■□□□ 1.03
CBX3-204ENST00000456948 WBP11Q9Y2W2 641 aaKnown RBP21.51■■□□□ 1.03
CBX3-204ENST00000456948 RELNP78509 3460 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 AZIN1O14977 448 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 RGS14O43566 566 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 IGKV3-11P04433 115 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 ALDH3A1P30838 453 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 TIA1P31483 386 aaKnown RBP eCLIP21.5■■□□□ 1.03
CBX3-204ENST00000456948 HTR6P50406 440 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 ST13P50502 369 aaKnown RBP21.5■■□□□ 1.03
CBX3-204ENST00000456948 ZNF844Q08AG5 666 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 KRTCAP3Q53RY4 240 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 CEP85LQ5SZL2 805 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 ZNF324BQ6AW86 544 aaPredicted RBP21.5■■□□□ 1.03
CBX3-204ENST00000456948 GALNT18Q6P9A2 607 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 SCIMPQ6UWF3 145 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 DND1Q8IYX4 353 aaKnown RBP21.5■■□□□ 1.03
CBX3-204ENST00000456948 APIPQ96GX9 242 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 RASL10BQ96S79 203 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 LIN28AQ9H9Z2 209 aaKnown RBP21.5■■□□□ 1.03
CBX3-204ENST00000456948 CXorf21Q9HAI6 301 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 PFDN4Q9NQP4 134 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 SIRT5Q9NXA8 310 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 SEC14L3Q9UDX4 400 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 CFL2Q9Y281 166 aa21.5■■□□□ 1.03
CBX3-204ENST00000456948 WASHC1A8K0Z3 465 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 PRKNO60260 465 aaPredicted RBP21.49■■□□□ 1.03
CBX3-204ENST00000456948 RSL1D1O76021 490 aaKnown RBP21.49■■□□□ 1.03
CBX3-204ENST00000456948 ANXA4P09525 319 aaPredicted RBP21.49■■□□□ 1.03
CBX3-204ENST00000456948 CHN1P15882 459 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 FOXA1P55317 472 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.49■■□□□ 1.035e-25■□□□□ 10.5
CBX3-204ENST00000456948 IL20RBQ6UXL0 311 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 GFRALQ6UXV0 394 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.49■■□□□ 1.03
CBX3-204ENST00000456948 TAGAPQ8N103 731 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 ZNF321PQ8N8H1 164 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 OR7G1Q8NGA0 311 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 PPP1R14CQ8TAE6 165 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 SSU72Q9NP77 194 aaKnown RBP21.49■■□□□ 1.03
CBX3-204ENST00000456948 SLC17A7Q9P2U7 560 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 UTS2RQ9UKP6 389 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 DLGAP4Q9Y2H0 992 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 ZGRF1Q86YA3 2104 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 FLNCQ14315 2725 aa21.49■■□□□ 1.03
CBX3-204ENST00000456948 DOPEY2Q9Y3R5 2298 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 ASPDHA6ND91 283 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 CAPN14A8MX76 684 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 NEFHP12036 1026 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 SERPINB3P29508 390 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 PIGGQ5H8A4 983 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 LRIG3Q6UXM1 1119 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 RTL4Q6ZR62 310 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 UCN3Q969E3 161 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 GAL3ST4Q96RP7 486 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 HES7Q9BYE0 225 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 CES1P1Q9UKY3 287 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 ENTPD4Q9Y227 616 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 CROCCQ5TZA2 2017 aa21.48■■□□□ 1.03
CBX3-204ENST00000456948 POLEQ07864 2286 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 C2orf92A0A1B0GVN3 265 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 TMEM200CA6NKL6 621 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms