RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LIM2P55344 173 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 CAV3P56539 151 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 OR2B6P58173 313 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 SEC23BQ15437 767 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 IFI44LQ53G44 452 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TMEM31Q5JXX7 168 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 ANKRD54Q6NXT1 300 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TNFAIP8L2Q6P589 184 aaPredicted RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TMIGD1Q6UXZ0 262 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 COMMD6Q7Z4G1 85 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 LRRC56Q8IYG6 542 aaPredicted RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 OR2L2Q8NH16 312 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TRNT1Q96Q11 434 aaKnown RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 CTPS2Q9NRF8 586 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TAF4O00268 1085 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 RTCAO00442 366 aaKnown RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 ADAMDEC1O15204 470 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 KLHL18O94889 574 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 KLK1P06870 262 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TAS2R50P59544 299 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 CSTF3Q12996 717 aaKnown RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 PUM1Q14671 1186 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 LINC00299Q6ZSB3 139 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 AMZ2Q86W34 360 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TRIM48Q8IWZ4 208 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 FAM9CQ8IZT9 166 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 KBTBD8Q8NFY9 601 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TFGQ92734 400 aaPredicted RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 RAB8BQ92930 207 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 COX14Q96I36 57 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 OPALINQ96PE5 141 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 OR2A14Q96R47 310 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 HDAC8Q9BY41 377 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 EPHX3Q9H6B9 360 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 NMNAT1Q9HAN9 279 aaPredicted RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 CLEC1BQ9P126 229 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TNRC18O15417 2968 aaPredicted RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 TRBC2A0A5B9 178 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 K7EQS6 105 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 UGDHO60701 494 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 MED26O95402 600 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 STATHP02808 62 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 HTR3AP46098 478 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 C2orf80Q0P641 193 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 GCNT6Q5T4J0 391 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 THOC7Q6I9Y2 204 aaKnown RBP11.78□□□□□ -0.52
LINC00959-201ENST00000456581 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 FCGR1BQ92637 280 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 CEP19Q96LK0 163 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 HHATLQ9HCP6 504 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 SNX11Q9Y5W9 270 aa11.78□□□□□ -0.52
LINC00959-201ENST00000456581 ARHGEF17Q96PE2 2063 aaPredicted RBP11.77□□□□□ -0.52
LINC00959-201ENST00000456581 PIPSLA2A3N6 862 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ISPDA4D126 451 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 GADD45GO95257 159 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 NTN1O95631 604 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 PTTG1O95997 202 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 APODP05090 189 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ACP5P13686 325 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 TIA1P31483 386 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00959-201ENST00000456581 PNLIPRP1P54315 467 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CDK6Q00534 326 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 PRKCDQ05655 676 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 IRF4Q15306 451 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF79Q15937 498 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 AGAP6Q5VW22 663 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 MED27Q6P2C8 311 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 SLC34A3Q8N130 599 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CHTF18Q8WVB6 975 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 UCN3Q969E3 161 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 AGAP4Q96P64 663 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ASPNQ9BXN1 380 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 PLCXD1Q9NUJ7 323 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
LINC00959-201ENST00000456581 MOSPD1Q9UJG1 213 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 KCNK6Q9Y257 313 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 POFUT2Q9Y2G5 429 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 WASHC1A8K0Z3 465 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 IDH3BO43837 385 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CCNB2O95067 398 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 SLC15A1P46059 708 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CLCNKAP51800 687 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF45Q02386 682 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ITPRIPL2Q3MIP1 535 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ATAT1Q5SQI0 421 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 LIPKQ5VXJ0 399 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 PAMR1Q6UXH9 720 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 WASH2PQ6VEQ5 465 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 MSANTD1Q6ZTZ1 278 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CCDC190Q86UF4 302 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 VPS37AQ8NEZ2 397 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 MRPL38Q96DV4 380 aaKnown RBP11.77□□□□□ -0.53
LINC00959-201ENST00000456581 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.53
LINC00959-201ENST00000456581 TRMT61BQ9BVS5 477 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms