RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 ERVK-6Q9BXR3 956 aa11.37□□□□□ -0.59
TRA2B-206ENST00000456380 WWTR1Q9GZV5 400 aa11.37□□□□□ -0.59
TRA2B-206ENST00000456380 PRM3Q9NNZ6 103 aa11.37□□□□□ -0.59
TRA2B-206ENST00000456380 MS4A12Q9NXJ0 267 aa11.37□□□□□ -0.59
TRA2B-206ENST00000456380 ZNF629Q9UEG4 869 aaPredicted RBP11.37□□□□□ -0.59
TRA2B-206ENST00000456380 ERVK-19Q9WJR5 959 aa11.37□□□□□ -0.59
TRA2B-206ENST00000456380 ARHGAP21Q5T5U3 1957 aa11.37□□□□□ -0.59
TRA2B-206ENST00000456380 C15orf38-AP3S2A0A0A6YYH1 394 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 IQANK1A0A1B0GTG1 560 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 CLPSP04118 112 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TACR1P25103 407 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 GDF1P27539 372 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TIMP3P35625 211 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ZNF136P52737 540 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 HNRNPH2P55795 449 aaKnown RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 CBLBQ13191 982 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ZNF267Q14586 743 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 EBPQ15125 230 aaKnown RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 PAMR1Q6UXH9 720 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TMEM64Q6YI46 380 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 SLC29A4Q7RTT9 530 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 LRRC70Q7Z2Q7 622 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 MAATS1Q7Z4T9 603 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 CAMKMTQ7Z624 323 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ST13P4Q8IZP2 240 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 EXT2Q93063 718 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 UBE2E3Q969T4 207 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TSPAN17Q96FV3 270 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TRIM31Q9BZY9 425 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 RNF112Q9ULX5 631 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 FREM3P0C091 2139 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 JMJD1CQ15652 2540 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ANKRD33BA6NCL7 494 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 PLPP1O14494 284 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ATE1O95260 518 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ACSL3O95573 720 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 EPXP11678 715 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 STMN1P16949 149 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TNFRSF17Q02223 184 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 PCDH1Q08174 1060 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ILF2Q12905 390 aaKnown RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 SPRED3Q2MJR0 410 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 TMEM198Q66K66 360 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 BICRALQ6AI39 1079 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 RNF111Q6ZNA4 994 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 LACC1Q8IV20 430 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ZBED8Q8IZ13 594 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 HUS1BQ8NHY5 278 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 DIO2Q92813 273 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 RGMAQ96B86 450 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 LRRC46Q96FV0 321 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 GPR22Q99680 433 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 EPB41L4BQ9H329 900 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 UBQLN3Q9H347 655 aa11.36□□□□□ -0.59
TRA2B-206ENST00000456380 MTRF1LQ9UGC7 380 aaKnown RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 FOXD3Q9UJU5 478 aaPredicted RBP11.36□□□□□ -0.59
TRA2B-206ENST00000456380 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 TUBAL3A6NHL2 446 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 TRAPPC6AO75865 159 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 GPR75O95800 540 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 IL2RAP01589 272 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 RAF1P04049 648 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 DRD2P14416 443 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 SERPINB1P30740 379 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 SSTR1P30872 391 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 TLX1P31314 330 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-206ENST00000456380 AGFG1P52594 562 aaKnown RBP11.35□□□□□ -0.59
TRA2B-206ENST00000456380 FBXW4P57775 412 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 DDX39BQ13838 428 aaKnown RBP11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ZKSCAN8Q15776 578 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-206ENST00000456380 DEFB113Q30KQ7 82 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 FNDC7Q5VTL7 733 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 NSUN5P2Q63ZY6 315 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 VASNQ6EMK4 673 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ISCA2Q86U28 154 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ZCCHC7Q8N3Z6 543 aaKnown RBP11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ZNF441Q8N8Z8 693 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 LINC01560Q8TB33 94 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 RIT1Q92963 219 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 UCN3Q969E3 161 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ZNF597Q96LX8 424 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 RBBP8Q99708 897 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 SMR3AQ99954 134 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ZNF717Q9BY31 904 aaPredicted RBP11.35□□□□□ -0.59
TRA2B-206ENST00000456380 ALG9Q9H6U8 611 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 PLEKHF2Q9H8W4 249 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 PHF11Q9UIL8 331 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 SLC6A5Q9Y345 797 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 IKBKGQ9Y6K9 419 aa11.35□□□□□ -0.59
TRA2B-206ENST00000456380 A0A1W2PR48 441 aa11.34□□□□□ -0.59
TRA2B-206ENST00000456380 GLOD5A6NK44 160 aa11.34□□□□□ -0.59
TRA2B-206ENST00000456380 OR6C76A6NM76 312 aa11.34□□□□□ -0.59
TRA2B-206ENST00000456380 K7EPI3 171 aa11.34□□□□□ -0.59
TRA2B-206ENST00000456380 OR10H2O60403 315 aa11.34□□□□□ -0.59
TRA2B-206ENST00000456380 EEDO75530 441 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms