RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MPPE1Q53F39 396 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 FBXO48Q5FWF7 155 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 C3orf38Q5JPI3 329 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TNFAIP8L2Q6P589 184 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF584Q8IVC4 421 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ADGRF3Q8IZF5 1079 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR4N4Q8N0Y3 316 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NXPE1Q8N323 547 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ELOA3Q8NG57 546 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR13C4Q8NGS5 318 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 BRIX1Q8TDN6 353 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RAB40AQ8WXH6 277 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ARNTL2Q8WYA1 636 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NT5C3BQ969T7 300 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PSMG2Q969U7 264 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 EXOSC8Q96B26 276 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 IMP4Q96G21 291 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 BTF3L4Q96K17 158 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF514Q96K75 400 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF778Q96MU6 729 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 YIPF4Q9BSR8 244 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ATG10Q9H0Y0 220 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MRPS33Q9Y291 106 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 BOLA1Q9Y3E2 137 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SMIM35A0A1B0GVV1 85 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 LRRC72A6NJI9 287 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 YJEFN3A6XGL0 299 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 D6RAR5 112 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 E9PI62 339 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ARHGAP33O14559 1287 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ENPP3O14638 875 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 KCNQ2O43526 872 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SCO2O43819 266 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CACNG3O60359 315 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SPDEFO95238 335 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CYP17A1P05093 508 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 BCHEP06276 602 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GIPP09681 153 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PSMB1P20618 241 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ALAS2P22557 587 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SOX9P48436 509 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NOVP48745 357 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ARL4DP49703 201 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RGS19P49795 217 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ATXN1P54253 815 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GP2P55259 537 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SEMA3BQ13214 749 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 AANATQ16613 207 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF772Q68DY9 489 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SLC30A6Q6NXT4 461 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 C3orf33Q6P1S2 294 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ARRDC4Q8NCT1 418 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 OR52E4Q8NGH9 312 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 LHFPL5Q8TAF8 219 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TRIB2Q92519 343 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MARC2Q969Z3 335 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 C12orf42Q96LP6 360 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SLC2A13Q96QE2 648 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GPR20Q99678 358 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 EIF5A2Q9GZV4 153 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CCDC86Q9H6F5 360 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 KCNJ16Q9NPI9 418 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 LIPT1Q9Y234 373 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MED31Q9Y3C7 131 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ARL5AQ9Y689 179 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CCL22O00626 93 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NARSO43776 548 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SSX4O60224 188 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ACSL4O60488 711 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 UBL3O95164 117 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MPC1LP0DKB6 136 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CSNK2A2P19784 350 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RAB4AP20338 218 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MPIP34949 423 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 DLSTP36957 453 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 FRKP42685 505 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MTNR1BP49286 362 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MLLT6P55198 1093 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RACK1P63244 317 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 POU6F2P78424 691 aaPredicted RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 FCN2Q15485 313 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GRIK5Q16478 980 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 MAPK14Q16539 360 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ABCA11PQ4W5N1 156 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TCTE1Q5JU00 501 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 FRMPD2BQ6IN97 320 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PAPD4Q6PIY7 484 aaKnown RBP4.79□□□□□ -1.64
PCDH9-203ENST00000456367 PXKQ7Z7A4 578 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 IQCHQ86VS3 1027 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ADGRG3Q86Y34 549 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF283Q8N7M2 679 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 IL17RDQ8NFM7 739 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 CLEC4DQ8WXI8 215 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 C1orf74Q96LT6 269 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 ZNF354BQ96LW1 612 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 GPER1Q99527 375 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 SAP130Q9H0E3 1048 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms