RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 OR12D1P0DN82 309 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 PPP2R1BP30154 601 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 GPC1P35052 558 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 UGT2B10P36537 528 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 PBX2P40425 430 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ADPRHP54922 357 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 SEC13P55735 322 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 TUBA1BP68363 451 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ILKQ13418 452 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 IRF3Q14653 427 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ATAT1Q5SQI0 421 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 DCST1Q5T197 706 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 TUBA1AQ71U36 451 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ACOT4Q8N9L9 421 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 C9orf43Q8TAL5 461 aaPredicted RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 CHPT1Q8WUD6 406 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 COX4I2Q96KJ9 171 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ANKHQ9HCJ1 492 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 AMBNQ9NP70 447 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 SEMA3GQ9NS98 782 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 NDOR1Q9UHB4 597 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 COLEC10Q9Y6Z7 277 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 PRR23AA6NEV1 266 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 EFCAB10A6NFE3 127 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 EFCAB9A8MZ26 197 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 HAT1O14929 419 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ERI3O43414 337 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 SULT1C4O75897 302 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 NADKO95544 446 aaPredicted RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 H1F0P07305 194 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 OSMP13725 252 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ATP5A1P25705 553 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 ELAVL4P26378 380 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 LIPAP38571 399 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 SOX9P48436 509 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 NCBP2P52298 156 aaKnown RBP eCLIP14.25□□□□□ -0.13
LDLR-202ENST00000455727 NCS1P62166 190 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 LSM3P62310 102 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 GNA13Q14344 377 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 TIGD6Q17RP2 521 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 SDE2Q6IQ49 451 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 STX19Q8N4C7 294 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 FAM46DQ8NEK8 389 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 MOAP1Q96BY2 351 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 BBS4Q96RK4 519 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 FUZQ9BT04 418 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 RPP25Q9BUL9 199 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 SPATA5L1Q9BVQ7 753 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 PRDM8Q9NQV8 689 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 ZCCHC3Q9NUD5 404 aaKnown RBP14.25□□□□□ -0.13
LDLR-202ENST00000455727 GPR83Q9NYM4 423 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 REV1Q9UBZ9 1251 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 OSGIN1Q9UJX0 560 aa14.25□□□□□ -0.13
LDLR-202ENST00000455727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.25□□□□□ -0.13
LDLR-202ENST00000455727 A0A1W2PR48 441 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 MAGEB3O15480 346 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 CD72P21854 359 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 CMPK1P30085 196 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PEBP1P30086 187 aaKnown RBP14.24□□□□□ -0.13
LDLR-202ENST00000455727 KHKP50053 298 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 OLR1P78380 273 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 ST3GAL4Q11206 333 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SYPL1Q16563 259 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 TMEM196Q5HYL7 178 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 ZNF425Q6IV72 752 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 DCDC5Q6ZRR9 648 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 IGFN1Q86VF2 1251 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 MFSD9Q8NBP5 474 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 BBS10Q8TAM1 723 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 ABTB1Q969K4 478 aaPredicted RBP14.24□□□□□ -0.13
LDLR-202ENST00000455727 CDCA4Q9BXL8 241 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 CLN6Q9NWW5 311 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 MS4A12Q9NXJ0 267 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SELENONQ9NZV5 590 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SCML1Q9UN30 329 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SNX7Q9UNH6 387 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PCDHGA4Q9Y5G9 962 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PMF1-BGLAPU3KQ54 211 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SLITRK5O94991 958 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 STSP08842 583 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 NR2F1P10589 423 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 CNR2P34972 360 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 IDUAP35475 653 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 NUDT6P53370 316 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 CRISP3P54108 245 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SNRPGP62308 76 aaKnown RBP14.24□□□□□ -0.13
LDLR-202ENST00000455727 LRRC32Q14392 662 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 SHHQ15465 462 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PRAMEF8Q5VWM4 474 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PRAMEF7Q5VXH5 474 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 PTCHD4Q6ZW05 846 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 ADCK1Q86TW2 530 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 FBXL6Q8N531 539 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 TMCO5AQ8N6Q1 288 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 B3GNT7Q8NFL0 401 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 OR6Q1Q8NGQ2 317 aa14.24□□□□□ -0.13
LDLR-202ENST00000455727 OR8K5Q8NH50 307 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms