RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MRPL39Q9NYK5 338 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 PRAMEF4O60810 478 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 HBQ1P09105 142 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 OR12D1P0DN82 309 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 CTSOP43234 321 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 PRAMEF9Q5VWM5 478 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 CDC73Q6P1J9 531 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 CHST9Q7L1S5 443 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 DEFB128Q7Z7B8 93 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 PROKR2Q8NFJ6 384 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 SMG9Q9H0W8 520 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 SBF1O95248 1867 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 HYKKA2RU49 373 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 ADAP00813 363 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 EPHX1P07099 455 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 ACVR2AP27037 513 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 GABRR2P28476 465 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 WNT4P56705 351 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 FCN2Q15485 313 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 DCAF4L2Q8NA75 395 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 ZNF740Q8NDX6 193 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 MAGEB10Q96LZ2 347 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 SLC22A12Q96S37 553 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 V9GYH0 126 aa13.19□□□□□ -0.3
UBE2D3-210ENST00000453744 TMEM202A6NGA9 273 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 PRKYO43930 277 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ELNP15502 786 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 RPL3P39023 403 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 PFN3P60673 137 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 POLR2LP62875 67 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 POU6F2P78424 691 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 L3MBTL4Q8NA19 623 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 OR10H4Q8NGA5 316 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 OR51V1Q9H2C8 321 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 MN1Q10571 1320 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 TEX46H3BTG2 121 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 PGRMC2O15173 223 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ATG13O75143 517 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 CD9P21926 228 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ETV5P41161 510 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ETV6P41212 452 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ETV1P50549 477 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ATP12AP54707 1039 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 HYAL2Q12891 473 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ALG1LQ6GMV1 187 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 USP50Q70EL3 339 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 OR4F15Q8NGB8 312 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ZFAND1Q8TCF1 268 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 CREB3L4Q8TEY5 395 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 TM9SF4Q92544 642 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 AP2M1Q96CW1 435 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 SECISBP2Q96T21 854 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 CNIH4Q9P003 139 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 HLA-DPB1P04440 258 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 STOMP27105 288 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 MLLT3P42568 568 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 EPHB3P54753 998 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 MLLT11Q13015 90 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 ASAH1Q13510 395 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 HSDL2Q6YN16 418 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 TMEM145Q8NBT3 493 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 C16orf78Q8WTQ4 265 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 MS4A4AQ96JQ5 239 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 PAK6Q9NQU5 681 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 LCTP09848 1927 aa13.18□□□□□ -0.3
UBE2D3-210ENST00000453744 IL1AP01583 271 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 F11P03951 625 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 FCER2P06734 321 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 CD22P20273 847 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 CD70P32970 193 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 SMSP52788 366 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 RRAS2P62070 204 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 TBPL1P62380 186 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 LMAN2Q12907 356 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 MTAPQ13126 283 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 NTRK2Q16620 822 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 YIF1BQ5BJH7 314 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 UBTD2Q8WUN7 234 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 SAP130Q9H0E3 1048 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 OSGEPL1Q9H4B0 414 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 EGLN3Q9H6Z9 239 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 FAM170BA6NMN3 283 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 CHURC1-FNTBB4DL54 471 aa13.17□□□□□ -0.3
UBE2D3-210ENST00000453744 PDHA2P29803 388 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms