RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PHEXP78562 749 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 HGFACQ04756 655 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 LGALS3BPQ08380 585 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 IFFO1Q0D2I5 559 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 BST2Q10589 180 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDH17Q12864 832 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 GRIK2Q13002 908 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ART3Q13508 389 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CDH18Q13634 790 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 EXOSC2Q13868 293 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 HEPACAMQ14CZ8 416 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 NONOQ15233 471 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 NPTX1Q15818 432 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SYTL3Q4VX76 610 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 C6orf226Q5I0X4 101 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMEM31Q5JXX7 168 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF658Q5TYW1 1059 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 GGNBP1Q5YKI7 109 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 RGMBQ6NW40 437 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLXDC2Q6UX71 529 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 HSDL2Q6YN16 418 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF517Q6ZMY9 492 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CCDC25Q86WR0 208 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLD3Q8IV08 490 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ITPRIPQ8IWB1 547 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 FBXL16Q8N461 479 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 D2HGDHQ8N465 521 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC44A5Q8NCS7 719 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR56A1Q8NGH5 318 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR51L1Q8NGJ5 315 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 FANK1Q8TC84 345 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 MARCH1Q8TCQ1 289 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SSMEM1Q8WWF3 244 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ASB5Q8WWX0 329 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 MAP4K1Q92918 833 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 LHX4Q969G2 390 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 GLYATL1Q969I3 302 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZG16BQ96DA0 208 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 TM4SF19Q96DZ7 209 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF514Q96K75 400 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 FAM20AQ96MK3 541 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 GLT1D1Q96MS3 346 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 AMDHD1Q96NU7 426 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 LMF2Q9BU23 707 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CHID1Q9BWS9 393 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 RBM24Q9BX46 236 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PLA2G12BQ9BX93 195 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 LRRC2Q9BYS8 371 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 OR2AG1Q9H205 316 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 MARCH7Q9H992 704 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 DMAP1Q9NPF5 467 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SMOXQ9NWM0 555 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CLEC5AQ9NY25 188 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 CISD1Q9NZ45 108 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ADAM22Q9P0K1 906 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 STOX2Q9P2F5 926 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PSMC3IPQ9P2W1 217 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 SLC9A2Q9UBY0 812 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF346Q9UL40 294 aaKnown RBP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 FZD4Q9ULV1 537 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 MYRFQ9Y2G1 1151 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 TMED7Q9Y3B3 224 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 WDR45Q9Y484 360 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PPIAL4AQ9Y536 164 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 NME7Q9Y5B8 376 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 PUS1Q9Y606 427 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 MST1RQ04912 1400 aa4.11□□□□□ -1.75
HMGB3P21-201ENST00000452483 TRAV24A0A0B4J272 114 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 GSTTP1A0A1W2PQM5 241 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 DPPA5A6NC42 116 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 CXorf65A6NEN9 183 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 H7C1Q1 480 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 P2RY10O00398 339 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ITGB1BP1O14713 200 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 NBR2O15453 112 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 COCHO43405 550 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 TPST2O60704 377 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ATP6AP2O75787 350 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 RGS11O94810 467 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 MT-ND2P03891 347 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 F7P08709 466 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ALOX5P09917 674 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 COMTP21964 271 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 LAP3P28838 519 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 HOXA9P31269 272 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PRKAR2BP31323 418 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PTGER4P35408 488 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 RPS19P39019 145 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 GPR12P47775 334 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 KCNJ3P48549 501 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 ZNF84P51523 738 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 RWDD2BP57060 319 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 NXPH1P58417 271 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 UBE2G2P60604 165 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 EEF1A1P68104 462 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 PAX5Q02548 391 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 EEF1A2Q05639 463 aaKnown RBP4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 KRTAP1-1Q07627 177 aa4.1□□□□□ -1.75
HMGB3P21-201ENST00000452483 STX5Q13190 355 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms