RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.56
CPSF4-208ENST00000452047 FAM166BA8MTA8 275 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 PGRMC2O15173 223 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 RIPK2O43353 540 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 OR10H2O60403 315 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 OTCP00480 354 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 TPOP07202 933 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 SLC35E2P0CK97 266 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 CNR1P21554 472 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 GALNSP34059 522 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 PPIAP62937 165 aaKnown RBP11.52□□□□□ -0.57
CPSF4-208ENST00000452047 EBPQ15125 230 aaKnown RBP11.52□□□□□ -0.57
CPSF4-208ENST00000452047 FAM219BQ5XKK7 198 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 OR52E8Q6IFG1 317 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 ARHGAP11AQ6P4F7 1023 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 TIFABQ6ZNK6 161 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 GK5Q6ZS86 529 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 CD163Q86VB7 1156 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 SLC22A16Q86VW1 577 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 METTL4Q8N3J2 472 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 MARVELD2Q8N4S9 558 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 KIF18AQ8NI77 898 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 RIT1Q92963 219 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 CNPPD1Q9BV87 410 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 MRPL1Q9BYD6 325 aaKnown RBP11.52□□□□□ -0.57
CPSF4-208ENST00000452047 TXLNGYQ9BZA5 131 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 WWTR1Q9GZV5 400 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 WDR41Q9HAD4 459 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 FARSBQ9NSD9 589 aaKnown RBP11.52□□□□□ -0.57
CPSF4-208ENST00000452047 SACM1LQ9NTJ5 587 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF4-208ENST00000452047 ADAM29Q9UKF5 820 aa11.52□□□□□ -0.57
CPSF4-208ENST00000452047 CELSR1Q9NYQ6 3014 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 C19orf84I3L1E1 186 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 ACOT7O00154 380 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 PDE9AO76083 593 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 CLDN14O95500 239 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 IGHG3P01860 377 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 KLK1P06870 262 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 FBXO45P0C2W1 286 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 TSPAN8P19075 237 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 DNASE1L1P49184 302 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 CDH13P55290 713 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 GALNT1Q10472 559 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-208ENST00000452047 IFT88Q13099 833 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-208ENST00000452047 HYAL4Q2M3T9 481 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 EMC4Q5J8M3 183 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 NDUFAF5Q5TEU4 345 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-208ENST00000452047 RNF111Q6ZNA4 994 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 FAM47EQ6ZV65 393 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 TRMT10CQ7L0Y3 403 aaKnown RBP11.51□□□□□ -0.57
CPSF4-208ENST00000452047 COMMD6Q7Z4G1 85 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 MILR1Q7Z6M3 343 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 MCEMP1Q8IX19 187 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 EID3Q8N140 333 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 SLC15A4Q8N697 577 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 TMEM251Q8N6I4 163 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 CEP112Q8N8E3 955 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 MYRIPQ8NFW9 859 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 SLC22A8Q8TCC7 542 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 MTBPQ96DY7 904 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 SPACA9Q96E40 222 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-208ENST00000452047 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 EPB41L4BQ9H329 900 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 ELOVL6Q9H5J4 265 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 CXorf21Q9HAI6 301 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 IL1RL2Q9HB29 575 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 TMEM216Q9P0N5 145 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 LIPGQ9Y5X9 500 aa11.51□□□□□ -0.57
CPSF4-208ENST00000452047 IQANK1A0A1B0GTG1 560 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 OR6C76A6NM76 312 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 PDYNP01213 254 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 P04436 131 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 CT62P0C5K7 136 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 SSTR4P31391 388 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 PTGER4P35408 488 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 HSD17B3P37058 310 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 PIGAP37287 484 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 MAGEA5P43359 124 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 FUT7Q11130 342 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 TBL3Q12788 808 aaKnown RBP11.5□□□□□ -0.57
CPSF4-208ENST00000452047 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 SGO1Q5FBB7 561 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 LGSNQ5TDP6 509 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 SLC29A4Q7RTT9 530 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 PAGE2Q7Z2X7 111 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 LCA5Q86VQ0 697 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 IFT20Q8IY31 132 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 DND1Q8IYX4 353 aaKnown RBP11.5□□□□□ -0.57
CPSF4-208ENST00000452047 FAM109AQ8N4B1 249 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 TRPC4APQ8TEL6 797 aa11.5□□□□□ -0.57
CPSF4-208ENST00000452047 TMEM237Q96Q45 408 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms