RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ZNHIT1O43257 154 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 OR10H2O60403 315 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 PDYNP01213 254 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 CLPSP04118 112 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 GSTA1P08263 222 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 IMPDH1P20839 514 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 ERVK-8P63133 956 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 ZNF267Q14586 743 aaPredicted RBP17.92■□□□□ 0.46
USP40-207ENST00000450940 HYAL4Q2M3T9 481 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 CCNYL2Q5T2Q4 361 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 NDUFAF5Q5TEU4 345 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 COMMD6Q7Z4G1 85 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 OR52N2Q8NGI0 321 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 FAM57AQ8TBR7 257 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 SLC22A8Q8TCC7 542 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 AGAP11Q8TF27 550 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 SREK1Q8WXA9 508 aaKnown RBP17.92■□□□□ 0.46
USP40-207ENST00000450940 DMRTA2Q96SC8 542 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 VKORC1Q9BQB6 163 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 FAM173AQ9BQD7 235 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 ZDHHC11Q9H8X9 412 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 CXorf21Q9HAI6 301 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 PSMC3IPQ9P2W1 217 aaPredicted RBP17.92■□□□□ 0.46
USP40-207ENST00000450940 ERVK-19Q9WJR5 959 aa17.92■□□□□ 0.46
USP40-207ENST00000450940 LRBAP50851 2863 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 A0A0G2JMM0 328 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 A0A1B0GTH9 108 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 A0A1W2PPB8 328 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 A0A1W2PRS3 328 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 KIR3DP1A8MWS1 328 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 PRSS44E7EML9 344 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 PRRG2O14669 202 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 OR4F21O95013 312 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 TSPAN8P19075 237 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 ATP5F1P24539 256 aaPredicted RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 PIK3R1P27986 724 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 PTGS2P35354 604 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 SMSP52788 366 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 PRKAA2P54646 552 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 PPIAP62937 165 aaKnown RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 GALNT1Q10472 559 aaPredicted RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 FOXO1Q12778 655 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 TBL3Q12788 808 aaKnown RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 ZNF630Q2M218 657 aaPredicted RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 SGO1Q5FBB7 561 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 TEX35Q5T0J7 233 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 RNF111Q6ZNA4 994 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 GK5Q6ZS86 529 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 DND1Q8IYX4 353 aaKnown RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 LRRN4CLQ8ND94 238 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 OR4K14Q8NGD5 310 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 SELENOMQ8WWX9 145 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 TRIM44Q96DX7 344 aaPredicted RBP17.91■□□□□ 0.46
USP40-207ENST00000450940 TMEM237Q96Q45 408 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 ZNF382Q96SR6 550 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 CNPPD1Q9BV87 410 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 TTTY12Q9BZ98 90 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 WWTR1Q9GZV5 400 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 SACM1LQ9NTJ5 587 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 CES1P1Q9UKY3 287 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 SLC12A4Q9UP95 1085 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 CACNA1CQ13936 2221 aa17.91■□□□□ 0.46
USP40-207ENST00000450940 A0A1W2PS29 197 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 HNRNPRO43390 633 aaKnown RBP17.9■□□□□ 0.46
USP40-207ENST00000450940 GUCY1B2O75343 617 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 SUPT7LO94864 414 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 FBXO45P0C2W1 286 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 CCL3P10147 92 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 HSD3B1P14060 373 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 HSD3B2P26439 372 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 FUT7Q11130 342 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 EBPQ15125 230 aaKnown RBP17.9■□□□□ 0.46
USP40-207ENST00000450940 RASA2Q15283 850 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 ARHGAP11AQ6P4F7 1023 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 SH2D5Q6ZV89 423 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 SLC29A4Q7RTT9 530 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 TICAM1Q8IUC6 712 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 SLC22A9Q8IVM8 553 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 EID3Q8N140 333 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 ZNF441Q8N8Z8 693 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 DOK4Q8TEW6 326 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 PAQR8Q8TEZ7 354 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 TP53INP1Q96A56 240 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 SPACA9Q96E40 222 aaPredicted RBP17.9■□□□□ 0.46
USP40-207ENST00000450940 L3HYPDHQ96EM0 354 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 L2HGDHQ9H9P8 463 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 IL1RL2Q9HB29 575 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 NMRK1Q9NWW6 199 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 DCDC2Q9UHG0 476 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 PCDHA9Q9Y5H5 950 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 HRH3Q9Y5N1 445 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 APCP25054 2843 aa17.9■□□□□ 0.46
USP40-207ENST00000450940 ARHGAP10A1A4S6 786 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 C1orf226A1L170 272 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 MANBAO00462 879 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 IGHG3P01860 377 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 P04436 131 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 PYGBP11216 843 aa17.89■□□□□ 0.45
USP40-207ENST00000450940 GRNP28799 593 aaKnown RBP17.89■□□□□ 0.45
USP40-207ENST00000450940 XKP51811 444 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms