RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 L7N2F9 121 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 CLIC1O00299 241 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SIGLEC5O15389 551 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SLC19A2O60779 497 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 EIF3GO75821 320 aaKnown RBP eCLIP8.2□□□□□ -1.1
LSM5-208ENST00000450169 OTCP00480 354 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 HIST1H2AGP0C0S8 130 aaPredicted RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 ZNF806P0C7X5 589 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 HIST1H2ADP20671 130 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 LMO2P25791 158 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 STC1P52823 247 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 CLDN8P56748 225 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ZP1P60852 638 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ERVK-25P63136 954 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SIGLEC14Q08ET2 396 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ST3GAL2Q16842 350 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 EXOC3L2Q2M3D2 409 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PLK5Q496M5 336 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 HIST2H2AA3Q6FI13 130 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 AFTPHQ6ULP2 937 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 QSOX2Q6ZRP7 698 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 TSEN54Q7Z6J9 526 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 MRPL10Q7Z7H8 261 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 CRYBG2Q8N1P7 616 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 NKAPQ8N5F7 415 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 BEST4Q8NFU0 473 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 OR1S1Q8NH92 325 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SPPL2AQ8TCT8 520 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 HSD17B8Q92506 261 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 OTULINQ96BN8 352 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 HIST1H2AHQ96KK5 128 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 GPR21Q99679 349 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 HIST1H2AJQ99878 128 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SEMA4CQ9C0C4 833 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 WDCPQ9H6R7 721 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 LRTM1Q9HBL6 345 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 EQTNQ9NQ60 294 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 LATS2Q9NRM7 1088 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ASIC5Q9NY37 505 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 DNAJC27Q9NZQ0 273 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ZNF624Q9P2J8 865 aaPredicted RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 FTSJ1Q9UET6 329 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 GPN3Q9UHW5 284 aaPredicted RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 CLCA2Q9UQC9 943 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 RAI2Q9Y5P3 530 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SBF1O95248 1867 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ANXA2P2A6NMY6 339 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 A8MVJ9 347 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 LDB2O43679 373 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SDC3O75056 442 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 RLN2P04090 185 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ALDOBP05062 364 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ACAA1P09110 424 aaPredicted RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 USP17L7P0C7H9 530 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 BCKDHAP12694 445 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ENGP17813 658 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 CXCL2P19875 107 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PREPP48147 710 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SELENOPP49908 381 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 AFF1P51825 1210 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 PRMT2P55345 433 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 FAM189BP81408 668 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 IL10RBQ08334 325 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PLD1Q13393 1074 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 GTF2H2Q13888 395 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PUM1Q14671 1186 aaKnown RBP eCLIP8.2□□□□□ -1.1
LSM5-208ENST00000450169 ZNF124Q15973 351 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 GSG1Q2KHT4 349 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 RNLSQ5VYX0 342 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 FCRLBQ6BAA4 426 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 VASNQ6EMK4 673 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 RAET1GQ6H3X3 334 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 GTF2H2CQ6P1K8 395 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 NXPE4Q6UWF7 544 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PDZD9Q8IXQ8 264 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 CAMKVQ8NCB2 501 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 EMID1Q96A84 441 aaPredicted RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 CCDC74AQ96AQ1 378 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 MRPL48Q96GC5 212 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 FCRL1Q96LA6 429 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PARK7Q99497 189 aaKnown RBP8.2□□□□□ -1.1
LSM5-208ENST00000450169 SLC25A51Q9H1U9 297 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SDHAF3Q9NRP4 125 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 EXTL2Q9UBQ6 330 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 SLC9A8Q9Y2E8 581 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 PMS2P1A4D2B8 440 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 PRRG1O14668 218 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 NCR1O76036 304 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 TFPIP10646 304 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 PEPDP12955 493 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 DRD2P14416 443 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 OGNP20774 298 aaKnown RBP8.19□□□□□ -1.1
LSM5-208ENST00000450169 AQP1P29972 269 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CALCRP30988 508 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 SCN1AP35498 2009 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CD86P42081 329 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 KCNJ5P48544 419 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 CRYBA2P53672 197 aa8.19□□□□□ -1.1
LSM5-208ENST00000450169 RPS14P62263 151 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms