RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 COX11Q9Y6N1 276 aa6.48□□□□□ -1.37
LINC00349-201ENST00000448748 SPTBN1Q01082 2364 aaKnown RBP6.48□□□□□ -1.37
LINC00349-201ENST00000448748 UNC79Q9P2D8 2635 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 POLEQ07864 2286 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CRYBG3Q68DQ2 2970 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 LOC105369274A0A096LPK9 316 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 LOC102723532A0A0G2JNH3 316 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 A0A1B0GX78 115 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CTAGE15A4D2H0 777 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 VSTM2BA6NLU5 285 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 DSCR3O14972 297 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 VPS4BO75351 444 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CEACAM4O75871 244 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CCNDBP1O95273 360 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CHRM2P08172 466 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CTAGE8P0CG41 777 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 SLC35E2BP0CK96 405 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 NPPBP16860 134 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 TCN2P20062 427 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 HRH2P25021 359 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CMPK1P30085 196 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 STX2P32856 288 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 GGT5P36269 586 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 SLC26A3P40879 764 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 MAGEA12P43365 314 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 SLC6A12P48065 614 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 PMS2P54278 862 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 PTCHD3Q3KNS1 767 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 NKAIN1Q4KMZ8 207 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CDKL4Q5MAI5 379 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 ATP1A1-AS1Q5TC04 95 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 AGTRAPQ6RW13 159 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 LCTLQ6UWM7 567 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 C3orf62Q6ZUJ4 267 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 VN1R4Q7Z5H5 301 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 PEG10Q86TG7 708 aaKnown RBP6.47□□□□□ -1.37
LINC00349-201ENST00000448748 ADAMTSL2Q86TH1 951 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CTAGE6Q86UF2 777 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CTAGE4Q8IX94 777 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 OR4N4Q8N0Y3 316 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 ZNF843Q8N446 348 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 NKAPQ8N5F7 415 aaKnown RBP6.47□□□□□ -1.37
LINC00349-201ENST00000448748 ENDOVQ8N8Q3 282 aaKnown RBP6.47□□□□□ -1.37
LINC00349-201ENST00000448748 GPATCH11Q8N954 259 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 PPFIBP2Q8ND30 876 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 OR2Y1Q8NGV0 311 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 KIF18AQ8NI77 898 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 MCOLN3Q8TDD5 553 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CDKL2Q92772 493 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 TM4SF19Q96DZ7 209 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 C17orf62Q9BQA9 187 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 SELENOSQ9BQE4 189 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 TXLNGYQ9BZA5 131 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 MLXIPLQ9NP71 852 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 MRPS30Q9NP92 439 aaKnown RBP6.47□□□□□ -1.37
LINC00349-201ENST00000448748 PPANQ9NQ55 473 aaKnown RBP6.47□□□□□ -1.37
LINC00349-201ENST00000448748 CCDC177Q9NQR7 707 aaPredicted RBP6.47□□□□□ -1.37
LINC00349-201ENST00000448748 NINJ2Q9NZG7 142 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 COPG2Q9UBF2 871 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 TAC3Q9UHF0 121 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 OARD1Q9Y530 152 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 SHANK1Q9Y566 2161 aa6.47□□□□□ -1.37
LINC00349-201ENST00000448748 ADGRG4Q8IZF6 3080 aa6.46□□□□□ -1.37
LINC00349-201ENST00000448748 CCDC189A1A4V9 331 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 F5H697 171 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 H0YGG7 62 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 H3BUI4 141 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 CDC7O00311 574 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 HAT1O14929 419 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 P2RX6O15547 441 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 ALDOAP04075 364 aaKnown RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 KLK3P07288 261 aaPredicted RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 UMODP07911 640 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 ABHD2P08910 425 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 CD1DP15813 335 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 RPA3P35244 121 aaPredicted RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 HNMTP50135 292 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 ARSFP54793 590 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 POLE2P56282 527 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 RAB10P61026 200 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 ARF3P61204 181 aaPredicted RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 RPS18P62269 152 aaKnown RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 CSNK1G2P78368 415 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 NKX6-1P78426 367 aaPredicted RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 DCDP81605 110 aaKnown RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 FAM53BQ14153 422 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 ZNF267Q14586 743 aaPredicted RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 EFTUD2Q15029 972 aaKnown RBP eCLIP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 TSNQ15631 228 aaKnown RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 WASHC2DQ5SRD0 308 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 GRTP1Q5TC63 336 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 GARNL3Q5VVW2 1013 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 PRMT9Q6P2P2 845 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 CCDC91Q7Z6B0 441 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 CENPLQ8N0S6 344 aaPredicted RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 AMER3Q8N944 861 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 EIF1ADQ8N9N8 165 aaKnown RBP6.46□□□□□ -1.38
LINC00349-201ENST00000448748 ATL1Q8WXF7 558 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 THAP4Q8WY91 577 aa6.46□□□□□ -1.38
LINC00349-201ENST00000448748 MR1Q95460 341 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms