RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MRPL1Q9BYD6 325 aaKnown RBP18.21■□□□□ 0.51
VCP-203ENST00000448530 TTTY12Q9BZ98 90 aa18.21■□□□□ 0.51
VCP-203ENST00000448530 RYDENQ9NUL5 291 aaKnown RBP18.21■□□□□ 0.51
VCP-203ENST00000448530 NMRK1Q9NWW6 199 aa18.21■□□□□ 0.51
VCP-203ENST00000448530 COQ3Q9NZJ6 369 aa18.21■□□□□ 0.51
VCP-203ENST00000448530 SLC12A4Q9UP95 1085 aa18.21■□□□□ 0.51
VCP-203ENST00000448530 CREBBPQ92793 2442 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 A0A0G2JMM0 328 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 A0A1W2PPB8 328 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 A0A1W2PRS3 328 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 OR6C76A6NM76 312 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 WASHC1A8K0Z3 465 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 KIR3DP1A8MWS1 328 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 COX6B1P14854 86 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 MAPK12P53778 367 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 CDH13P55290 713 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 TBL3Q12788 808 aaKnown RBP18.2■□□□□ 0.5
VCP-203ENST00000448530 SLC22A10Q63ZE4 541 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 LCA5Q86VQ0 697 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 TICAM1Q8IUC6 712 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 MYRIPQ8NFW9 859 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 OR4K14Q8NGD5 310 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 SELENOMQ8WWX9 145 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
VCP-203ENST00000448530 IL1RL2Q9HB29 575 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 PLSCR2Q9NRY7 297 aa18.2■□□□□ 0.5
VCP-203ENST00000448530 TEX10Q9NXF1 929 aaPredicted RBP18.2■□□□□ 0.5
VCP-203ENST00000448530 ZNF407Q9C0G0 2248 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 PGRMC2O15173 223 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 RIPK2O43353 540 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 ZNF354AO60765 605 aaPredicted RBP18.19■□□□□ 0.5
VCP-203ENST00000448530 RHOXF2BP0C7M4 288 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 CCL3P10147 92 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 TSPAN8P19075 237 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 SERPINB3P29508 390 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 ZNF791Q3KP31 576 aaPredicted RBP18.19■□□□□ 0.5
VCP-203ENST00000448530 HLA-DQA1Q5Y7H0 255 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 TMEM211Q6ICI0 200 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 ADGRD1Q6QNK2 874 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 TIFABQ6ZNK6 161 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 NCCRP1Q6ZVX7 275 aaPredicted RBP18.19■□□□□ 0.5
VCP-203ENST00000448530 RPS27LQ71UM5 84 aaKnown RBP18.19■□□□□ 0.5
VCP-203ENST00000448530 MCEMP1Q8IX19 187 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 CNPY4Q8N129 248 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 METTL4Q8N3J2 472 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 FAM109AQ8N4B1 249 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 FAM13CQ8NE31 585 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 CA5BP1Q8WTZ4 195 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 SPACA9Q96E40 222 aaPredicted RBP18.19■□□□□ 0.5
VCP-203ENST00000448530 DMRTA2Q96SC8 542 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 RHOXF2Q9BQY4 288 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 C1QTNF3Q9BXJ4 246 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 WWTR1Q9GZV5 400 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 TP63Q9H3D4 680 aaPredicted RBP18.19■□□□□ 0.5
VCP-203ENST00000448530 MYO9AB2RTY4 2548 aa18.19■□□□□ 0.5
VCP-203ENST00000448530 CACNA1CQ13936 2221 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 ADAM10O14672 748 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 SUPT7LO94864 414 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 GLSO94925 669 aaPredicted RBP18.18■□□□□ 0.5
VCP-203ENST00000448530 PDYNP01213 254 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 SNRPB2P08579 225 aaKnown RBP18.18■□□□□ 0.5
VCP-203ENST00000448530 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
VCP-203ENST00000448530 DNASE1L1P49184 302 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 SLC37A1P57057 533 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 KCNJ2P63252 427 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 CLCQ05315 142 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 LETMD1Q6P1Q0 360 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 COMMD6Q7Z4G1 85 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 GALNT12Q8IXK2 581 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 SRRM1Q8IYB3 904 aaKnown RBP18.18■□□□□ 0.5
VCP-203ENST00000448530 TRPC4APQ8TEL6 797 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 UCN3Q969E3 161 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 SDCCAG3Q96C92 435 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 ZDHHC11Q9H8X9 412 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 BRF2Q9HAW0 419 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 FARSBQ9NSD9 589 aaKnown RBP18.18■□□□□ 0.5
VCP-203ENST00000448530 CNIH4Q9P003 139 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 TRPS1Q9UHF7 1281 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.18■□□□□ 0.5
VCP-203ENST00000448530 DNAJC13O75165 2243 aa18.18■□□□□ 0.5
VCP-203ENST00000448530 C2orf92A0A1B0GVN3 265 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 GOLGA6L10A6NI86 522 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 CAPN14A8MX76 684 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 NADKO95544 446 aaPredicted RBP18.17■□□□□ 0.5
VCP-203ENST00000448530 KRT6AP02538 564 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 KRT6BP04259 564 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 SBK3P0C264 359 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 NT5EP21589 574 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 GCAP28676 217 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 PTGER4P35408 488 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 HSD17B3P37058 310 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 PIGAP37287 484 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 MAGEA5P43359 124 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 KRT6CP48668 564 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 XKP51811 444 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 EBPQ15125 230 aaKnown RBP18.17■□□□□ 0.5
VCP-203ENST00000448530 RASA2Q15283 850 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 TMEM151AQ8N4L1 468 aa18.17■□□□□ 0.5
VCP-203ENST00000448530 TMEM251Q8N6I4 163 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms