RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 KCNIP1Q9NZI2 227 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 NUFIP1Q9UHK0 495 aaKnown RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 MEGF11A6BM72 1044 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 DRGXA6NNA5 263 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PLOD2O00469 737 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 CNMDO75829 334 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 CRABP1P29762 137 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 CLDN8P56748 225 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 TECRLQ5HYJ1 363 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 IDNKQ5T6J7 187 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 STEAP4Q687X5 459 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 JAGN1Q8N5M9 183 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 IGSF8Q969P0 613 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 KLHL13Q9P2N7 655 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 SLC6A5Q9Y345 797 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 LRRC42Q9Y546 428 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 MAGED1Q9Y5V3 778 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 AHCYL1O43865 530 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 ZFAND5O76080 213 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF234Q14588 700 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF627Q7L945 461 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PLPP6Q8IY26 295 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 CCDC116Q8IYX3 515 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 FNDC8Q8TC99 324 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF576Q9H609 170 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 KIAA0100Q14667 2235 aaKnown RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 TULP2O00295 520 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 BCAT2O15382 392 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 LATO43561 262 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 CD72P21854 359 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 FKBP2P26885 142 aaKnown RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 ZFPM2Q8WW38 1151 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 TSACCQ96A04 125 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 TPK1Q9H3S4 243 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 NANSQ9NR45 359 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PEX14O75381 377 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 JRKO75564 520 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 SEMG2Q02383 582 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 NFATC4Q14934 902 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 MANEAQ5SRI9 462 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 HACD2Q6Y1H2 254 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 SNRNP27Q8WVK2 155 aaKnown RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 NECAB3Q96P71 396 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF317Q96PQ6 595 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PDLIM7Q9NR12 457 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 STOX2Q9P2F5 926 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 OR1A2Q9Y585 309 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 HSPE1-MOB4S4R3N1 261 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 LOC100130705A0A1B0GUX0 176 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 UNC119BA6NIH7 251 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PTGESO14684 152 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 PIAS1O75925 651 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 SIX3O95343 332 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 G6PDP11413 515 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 DGLUCYQ7Z3D6 616 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
PTPN3-204ENST00000446349 KLHDC8AQ8IYD2 350 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 KLHDC9Q8NEP7 349 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 OMA1Q96E52 524 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM9Q9P0T7 183 aa8.17□□□□□ -1.1
PTPN3-204ENST00000446349 FAM227AF5H4B4 570 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 BCKDHAP12694 445 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CD1DP15813 335 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 HTR1EP28566 365 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 AHRP35869 848 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GGT2P36268 569 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GANABQ14697 944 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PRAMEF17Q5VTA0 474 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SLC18B1Q6NT16 456 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 TDHQ8IZJ6 230 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 DNAAF1Q8NEP3 725 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR8K5Q8NH50 307 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SFXN5Q8TD22 340 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 MCOLN1Q9GZU1 580 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR10A4Q9H209 315 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 HEXAP06865 529 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 VIPR2P41587 438 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 PCBP2Q15366 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 DEFB134Q4QY38 66 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SHQ1Q6PI26 577 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF782Q6ZMW2 699 aaPredicted RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 CHERPQ8IWX8 916 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR5AK3PQ8NH89 298 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 OR14L1PQ8NHC6 308 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 C10orf82Q8WW14 230 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SLC22A4Q9H015 551 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 IL37Q9NZH6 218 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 GNG8Q9UK08 70 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ST14Q9Y5Y6 855 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SLX4Q8IY92 1834 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 A0A1B0GUL6 1792 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 E7ESA3 106 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SLC19A2O60779 497 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 DIRAS3O95661 229 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 SMAD4Q13485 552 aaKnown RBP8.16□□□□□ -1.1
PTPN3-204ENST00000446349 VWA5B1Q5TIE3 1220 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 ZDHHC24Q6UX98 284 aa8.16□□□□□ -1.1
PTPN3-204ENST00000446349 UEVLDQ8IX04 471 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms