RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 MMEL1Q495T6 779 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 TRMT12Q53H54 448 aaKnown RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 YOD1Q5VVQ6 348 aaPredicted RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 RINLQ6ZS11 566 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF621Q6ZSS3 439 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 BPHLQ86WA6 291 aaPredicted RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 CPSF7Q8N684 471 aaKnown RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ANKS4BQ8N8V4 417 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 SUN3Q8TAQ9 357 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 MVB12AQ96EY5 273 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 CRELD1Q96HD1 420 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 AMDHD1Q96NU7 426 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZPBPQ9BS86 351 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 NPLQ9BXD5 320 aaPredicted RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR8D2Q9GZM6 311 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 NRSN2Q9GZP1 204 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 RASSF4Q9H2L5 321 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 CXorf36Q9H7Y0 433 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF160Q9HCG1 818 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 PRDM9Q9NQV7 894 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZIM2Q9NZV7 527 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 BCAP29Q9UHQ4 241 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ATP6V1HQ9UI12 483 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 TCFL5Q9UL49 500 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 USP22Q9UPT9 525 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ERVK-11Q9UQG0 969 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 ERVK-19Q9WJR5 959 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 MRPS33Q9Y291 106 aaKnown RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 MSRB2Q9Y3D2 182 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 CLDN16Q9Y5I7 305 aa7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 PTPRZ1P23471 2315 aaPredicted RBP7.07□□□□□ -1.28
SF3A3P1-201ENST00000446317 SDK2Q58EX2 2172 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CELSR3Q9NYQ7 3312 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 VSTM2BA6NLU5 285 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CCT8L1PA6NM43 557 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 NPIPB8E9PQR5 432 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CLDN4O14493 209 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ANGPT2O15123 496 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CTNSO60931 367 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 GUCY1B2O75343 617 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 LIPCP11150 499 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CPMP14384 443 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 DRD2P14416 443 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PORP16435 677 aaPredicted RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CSNK2A2P19784 350 aaPredicted RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 JAK1P23458 1154 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PTPN4P29074 926 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TSFMP43897 325 aaKnown RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 RFX3P48380 749 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 NUDT2P50583 147 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ATP4BP51164 291 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CLNS1AP54105 237 aaKnown RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 MTPNP58546 118 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TRA2BP62995 288 aaKnown RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 HBA1P69905 142 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 SLC25A3Q00325 362 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 DUSP8Q13202 625 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TP53BP2Q13625 1128 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ATP1A4Q13733 1029 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PDE7AQ13946 482 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 NFYCQ13952 458 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CYLC2Q14093 348 aaPredicted RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TUBB8Q3ZCM7 444 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CPZQ66K79 652 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 BLOC1S3Q6QNY0 202 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TMEM64Q6YI46 380 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 IKBIPQ70UQ0 350 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TRPM8Q7Z2W7 1104 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PPP1R32Q7Z5V6 425 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 SCUBE1Q8IWY4 988 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF595Q8IYB9 648 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PRR22Q8IZ63 422 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 LRRC25Q8N386 305 aaPredicted RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 RNF148Q8N7C7 305 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR7G2Q8NG99 324 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 OR52R1Q8NGF1 315 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 KCNE4Q8WWG9 221 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 METTL21AQ8WXB1 218 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 STARD8Q92502 1023 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 JADE3Q92613 823 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 TANKQ92844 425 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 C16orf58Q96GQ5 468 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ZNF681Q96N22 645 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PANX1Q96RD7 426 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CCDC86Q9H6F5 360 aaKnown RBP7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 CPNE5Q9HCH3 593 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ADAP2Q9NPF8 381 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 GIMAP4Q9NUV9 329 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 SIRT5Q9NXA8 310 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 MS4A12Q9NXJ0 267 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 EHD3Q9NZN3 535 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 FBXL4Q9UKA2 621 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 ANGPTL2Q9UKU9 493 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 DTX4Q9Y2E6 619 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 NEUROG3Q9Y4Z2 214 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PCDHGA7Q9Y5G6 932 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 HS3ST3B1Q9Y662 390 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 PCNX2A6NKB5 2137 aa7.06□□□□□ -1.28
SF3A3P1-201ENST00000446317 RNF103-CHMP3A0A140T963 221 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms