RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 NPIPB8E9PQR5 432 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 CDK2AP1O14519 115 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 ITM2AO43736 263 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 MAN1A2O60476 641 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 CSNK2A2P19784 350 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 SLC1A6P48664 564 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 MLLT10P55197 1068 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 OC90Q02509 493 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 STX3Q13277 289 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 TUBA3CQ13748 450 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 ZNF267Q14586 743 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 SPRED3Q2MJR0 410 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 UGT3A2Q3SY77 523 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 TUBA3EQ6PEY2 450 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 DGAT2L6Q6ZPD8 337 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 Q6ZSR9 355 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 GALNT12Q8IXK2 581 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 KIRREL3Q8IZU9 778 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 ZNF321PQ8N8H1 164 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 OR5L2Q8NGL0 311 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 OR2T11Q8NH01 316 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 OR8K3Q8NH51 312 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 ZNF721Q8TF20 911 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 ARL8AQ96BM9 186 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 CCT7Q99832 543 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 TRIM4Q9C037 500 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 GIMAP4Q9NUV9 329 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 MAP10Q9P2G4 905 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 HEY2Q9UBP5 337 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 WBP11Q9Y2W2 641 aaKnown RBP16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 TMED5Q9Y3A6 229 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 PCDHGA10Q9Y5H3 936 aa16.24■□□□□ 0.19
SMARCAL1-209ENST00000444508 A0A1W2PS29 197 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 SKAP2O75563 359 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 NT5EP21589 574 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 FEN1P39748 380 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 WDR4P57081 412 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 ERVK-8P63133 956 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 RPL38P63173 70 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 C2orf80Q0P641 193 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 INPP5JQ15735 1006 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 GALNTL6Q49A17 601 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 CES4AQ5XG92 561 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 SAMD14Q8IZD0 417 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 ARMC10Q8N2F6 343 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 HORMAD2Q8N7B1 307 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 CPT1CQ8TCG5 803 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 ATP6V1G3Q96LB4 118 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 PPP3R2Q96LZ3 170 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 CXorf21Q9HAI6 301 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 MYNNQ9NPC7 610 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 MIEF1Q9NQG6 463 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 ANKRD10Q9NXR5 420 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 EHD3Q9NZN3 535 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 ERVK-19Q9WJR5 959 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 RAP2CQ9Y3L5 183 aa16.23■□□□□ 0.19
SMARCAL1-209ENST00000444508 GCN1Q92616 2671 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 FASNP49327 2511 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 LSM1O15116 133 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 PRKNO60260 465 aaPredicted RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 PRAMEF2O60811 474 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 ITGA10O75578 1167 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 IGKV3-11P04433 115 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 DDCP20711 480 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 CD96P40200 585 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 RNF4P78317 190 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 KIAA0040Q15053 153 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 OR1C1Q15619 314 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 ZNF750Q32MQ0 723 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 XKR7Q5GH72 579 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 ATG16L1Q676U5 607 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 RNF111Q6ZNA4 994 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 IKBIPQ70UQ0 350 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 TRIM42Q8IWZ5 723 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 LRRC25Q8N386 305 aaPredicted RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 TMEM156Q8N614 296 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 ZNF781Q8N8C0 355 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 DOK4Q8TEW6 326 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 EXOSC8Q96B26 276 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 ZNF395Q9H8N7 513 aaPredicted RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 MYOTQ9UBF9 498 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 ENTPD4Q9Y227 616 aa16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 YARS2Q9Y2Z4 477 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 HELZ2Q9BYK8 2649 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-209ENST00000444508 J3QKU1 62 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 HRKO00198 91 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 ATP1B1P05026 303 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 MAPK1P28482 360 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 TRHRP34981 398 aaPredicted RBP16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 CYB561P49447 251 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 ST13P50502 369 aaKnown RBP16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 HLCSP50747 726 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 RPL14P50914 215 aaKnown RBP16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 SSR4P51571 173 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 BST1Q10588 318 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 ATP6AP1LQ52LC2 224 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 FAM71E1Q6IPT2 247 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 SLC29A4Q7RTT9 530 aa16.21■□□□□ 0.19
SMARCAL1-209ENST00000444508 CISD2Q8N5K1 135 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms