RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 DHRS4L1P0CG22 281 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 POU2F1P14859 743 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 GLB1P16278 677 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 TOP3AQ13472 1001 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 SLCO4C1Q6ZQN7 724 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 CIB1Q99828 191 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 SLITRK2Q9H156 845 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 SLC17A4Q9Y2C5 497 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 NSG1A0A0A6YYJ2 146 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 MED26O95402 600 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 DRD3P35462 400 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 RBBP4Q09028 425 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ST3GAL3Q11203 375 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 TARDBPQ13148 414 aaKnown RBP eCLIP13.39□□□□□ -0.271e-8■■■■■ 27.7
SMARCA4-204ENST00000444061 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 LARP4Q71RC2 724 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 CTRCQ99895 268 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 ACPTQ9BZG2 426 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 C8orf4Q9NR00 106 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 EMCNQ9ULC0 261 aa13.39□□□□□ -0.27
SMARCA4-204ENST00000444061 HAT1O14929 419 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 CREG1O75629 220 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 MFN2O95140 757 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 H1F0P07305 194 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 DDCP20711 480 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 VWA5B2Q8N398 1253 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 NFKBIL1Q9UBC1 381 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 DHCR7Q9UBM7 475 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 PIAS2O75928 621 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 NME1P15531 152 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 CASP6P55212 293 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 RAB15P59190 212 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 TRA2BP62995 288 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 MANEAQ5SRI9 462 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 GALNT10Q86SR1 603 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 DCUN1D5Q9BTE7 237 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 IFT27Q9BW83 186 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 DNAJB9Q9UBS3 223 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 CABIN1Q9Y6J0 2220 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 PTPRFP10586 1907 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 TRBV5-4A0A0C4DH59 114 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 FAM227AF5H4B4 570 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 IGHEP01854 428 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 RAPSNQ13702 412 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 CLCA4Q14CN2 919 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 NANOGP8Q6NSW7 305 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 FIGNL1Q6PIW4 674 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 GALNT15Q8N3T1 639 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 ASB9Q96DX5 294 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 NANOGQ9H9S0 305 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 SLC23A2Q9UGH3 650 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 NXT1Q9UKK6 140 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 ANHXE9PGG2 379 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 ACOT7O00154 380 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 LDB3O75112 727 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 TEAD1P28347 426 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 GCAP28676 217 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 KCNJ5P48544 419 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 DMWDQ09019 674 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 SRSF5Q13243 272 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 LIN52Q52LA3 116 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 FAM180BQ6P0A1 224 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 BLOC1S3Q6QNY0 202 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 HSDL2Q6YN16 418 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 CLECL1Q8IZS7 167 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 TM9SF4Q92544 642 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 LRRN3Q9H3W5 708 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 CD93Q9NPY3 652 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 PNPLA3Q9NST1 481 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 KCND3Q9UK17 655 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 ACSL6Q9UKU0 697 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 PPIL1Q9Y3C6 166 aa13.38□□□□□ -0.27
SMARCA4-204ENST00000444061 C2orf92A0A1B0GVN3 265 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 BLACEA4D250 179 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 E2F3O00716 465 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 STX11O75558 287 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MC1RQ01726 317 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 RAB11FIP2Q7L804 512 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 OR8J3Q8NGG0 315 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 UBTD2Q8WUN7 234 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 S100A13Q99584 98 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 OSBPL11Q9BXB4 747 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 POLR2J3Q9H1A7 115 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 C14orf105Q9NVL8 296 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 ERGIC3Q9Y282 383 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 H0YIV9 168 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 RPS26P62854 115 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 ZP2Q05996 745 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 GARNL3Q5VVW2 1013 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 FAM83HQ6ZRV2 1179 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SVOPLQ8N434 492 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 TP53I13Q8NBR0 393 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 OR51Q1Q8NH59 317 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MCHR1Q99705 422 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 LRRC61Q9BV99 259 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SOX17Q9H6I2 414 aaPredicted RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SESN1Q9Y6P5 492 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms