RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KCTD14Q9BQ13 255 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRIM15Q9C019 465 aa7□□□□□ -1.29
CDC42BPA-208ENST00000442054 KAT8Q9H7Z6 458 aaKnown RBP7□□□□□ -1.29
CDC42BPA-208ENST00000442054 SCN2BO60939 215 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC16A8O95907 504 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 TFPTP0C1Z6 253 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 RAP2AP10114 183 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SFTPCP11686 197 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 IDUAP35475 653 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 KRT20P35900 424 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ABATP80404 500 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SRSF11Q05519 484 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 IL11RAQ14626 422 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAM199XQ6PEV8 388 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 LINC00299Q6ZSB3 139 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 FKBP9P1Q75LS8 142 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MILR1Q7Z6M3 343 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 BPHLQ86WA6 291 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF786Q8N393 782 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC15A4Q8N697 577 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR5K2Q8NHB8 316 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 APOBEC4Q8WW27 367 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 TUBGCP3Q96CW5 907 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 VMP1Q96GC9 406 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 PLEKHA8Q96JA3 519 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC46A1Q96NT5 459 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CDK15Q96Q40 435 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CPPED1Q9BRF8 314 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 TOR3AQ9H497 397 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 APMAPQ9HDC9 416 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 DCAF13Q9NV06 445 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPATA7Q9P0W8 599 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MUC22E2RYF6 1773 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CDH23Q9H251 3354 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCDC154A6NI56 674 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ANGPT2O15123 496 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRAMEF4O60810 478 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 EML2O95834 649 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 IGHEP01854 428 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 RYKP34925 604 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 PIK3CGP48736 1102 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SHBQ15464 509 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 TIGD2Q4W5G0 525 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ABHD17BQ5VST6 288 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRAMEF9Q5VWM5 478 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 OGFOD3Q6PK18 319 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 WASH2PQ6VEQ5 465 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 HS3ST5Q8IZT8 346 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 DHRSXQ8N5I4 330 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAR1Q8WVX9 515 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC35B4Q969S0 331 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 BARD1Q99728 777 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF304Q9HCX3 659 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ATP13A2Q9NQ11 1180 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MAGEL2Q9UJ55 1249 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ENPP5Q9UJA9 477 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 PSME2Q9UL46 239 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MKL2Q9ULH7 1088 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC22A14Q9Y267 594 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 TNPO3Q9Y5L0 923 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 FFAR3O14843 346 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 GPR42O15529 346 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC28A2O43868 658 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 UGT2B11O75310 529 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 KRT6AP02538 564 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MT-ND1P03886 318 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 KRT6BP04259 564 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ITGAMP11215 1152 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 IL10P22301 178 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCKBRP32239 447 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 GGT5P36269 586 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 KRT6CP48668 564 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 IST1P53990 364 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CASP6P55212 293 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 ARG2P78540 354 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MEF2AQ02078 507 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CHAF1BQ13112 559 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 NFYCQ13952 458 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 OXA1LQ15070 435 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 GPR107Q5VW38 600 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 GLYATQ6IB77 296 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 SULT1C3Q6IMI6 304 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 XKR5Q6UX68 686 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 GPRIN3Q6ZVF9 776 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 R3HCC1LQ7Z5L2 792 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 GLRX5Q86SX6 157 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 KMT5CQ86Y97 462 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 TCAIMQ8N3R3 496 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR4F6Q8NGB9 312 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 EXTL1Q92935 676 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 LIN37Q96GY3 246 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 RBM18Q96H35 190 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 C1orf50Q9BV19 199 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 NTMT1Q9BV86 223 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 MAGIXQ9H6Y5 334 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 CUTCQ9NTM9 273 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 NUDT4Q9NZJ9 180 aa6.99□□□□□ -1.29
CDC42BPA-208ENST00000442054 STOX2Q9P2F5 926 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms