RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 KRT84Q9NSB2 600 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 NDUFAF4Q9P032 175 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 DAPP1Q9UN19 280 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 SNX11Q9Y5W9 270 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 LYVE1Q9Y5Y7 322 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 SLC22A7Q9Y694 548 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 MYOCOSA0A1B0GUC4 107 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 GLOD5A6NK44 160 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 TLR4O00206 839 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 AXIN1O15169 862 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 B4GALT2O60909 372 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 WNT1P04628 370 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 ANXA8P13928 327 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 ETS2P15036 469 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 RHCEP18577 417 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 NELFEP18615 380 aaKnown RBP12.42□□□□□ -0.42
CPSF4-206ENST00000441580 CD247P20963 164 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 MATN1P21941 496 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 XCR1P46094 333 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 HLCSP50747 726 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 LIM2P55344 173 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 NUP107P57740 925 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 NXPH1P58417 271 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 C1orf61Q13536 156 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 NADK2Q4G0N4 442 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 DEFB134Q4QY38 66 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF691Q5VV52 312 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 FOXB2Q5VYV0 432 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 FAM180BQ6P0A1 224 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 TMEM107Q6UX40 140 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 SATL1Q86VE3 508 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 GIPC3Q8TF64 312 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 C10orf90Q96M02 699 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 HSPA12BQ96MM6 686 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF681Q96N22 645 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 FCRL4Q96PJ5 515 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 PITX2Q99697 317 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 APOL4Q9BPW4 351 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 GABARAPL3Q9BY60 117 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 AMBRA1Q9C0C7 1298 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 SOX17Q9H6I2 414 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-206ENST00000441580 TRPC4Q9UBN4 977 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 LIPT1Q9Y234 373 aa12.42□□□□□ -0.42
CPSF4-206ENST00000441580 GPC6Q9Y625 555 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-206ENST00000441580 TP53BP1Q12888 1972 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 CACNA1IQ9P0X4 2223 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 LOC100130705A0A1B0GUX0 176 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 BLACEA4D250 179 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 PGRMC2O15173 223 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 CASC3O15234 703 aaKnown RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 SEC24DO94855 1032 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 UBXN7O94888 489 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 DIRAS1O95057 198 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 MFN2O95140 757 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 CLIC3O95833 236 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 OR12D1P0DN82 309 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 NR2F1P10589 423 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 PVRP15151 417 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 CDH3P22223 829 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 TTKP33981 857 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 RYKP34925 604 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 PIGAP37287 484 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 MC3RP41968 323 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ALDH3B2P48448 385 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 LSSP48449 732 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 RANBP2P49792 3224 aaKnown RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 RGS19P49795 217 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 EPHA4P54764 986 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 MAZP56270 477 aaKnown RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ESRRGP62508 458 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 HPCAP84074 193 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 RPS26P11Q5JNZ5 115 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 WDR45BQ5MNZ6 344 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ATAD3BQ5T9A4 648 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 FRMPD2BQ6IN97 320 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 GPR153Q6NV75 609 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ISLR2Q6UXK2 745 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 FAM92BQ6ZTR7 304 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 TAGAPQ8N103 731 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 FRMD1Q8N878 549 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 OR10G2Q8NGC3 310 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 OR4K14Q8NGD5 310 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 OR4C15Q8NGM1 316 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 OR9A2Q8NGT5 310 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 LMX1AQ8TE12 382 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 TMEM131Q92545 1883 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 NR4A3Q92570 626 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 RAB8BQ92930 207 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF566Q969W8 418 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF354BQ96LW1 612 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 CD180Q99467 661 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 TREX2Q9BQ50 279 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 RIBC2Q9H4K1 309 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms