RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 AXIN1O15169 862 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ZSCAN9O15535 394 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 EMC8O43402 210 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 B3GALT2O43825 422 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 SLC28A2O43868 658 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 NDUFS2O75306 463 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 WNT1P04628 370 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 IFNW1P05000 195 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 OR12D1P0DN82 309 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 PVRP15151 417 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 NME1P15531 152 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 MATN1P21941 496 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 CPN2P22792 545 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 PPP2R1BP30154 601 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 GSTT1P30711 240 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 POLR2IP36954 125 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 FEN1P39748 380 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 LIMS1P48059 325 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 HMGA2P52926 109 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ARF3P61204 181 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 PRR5P85299 388 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 SPIBQ01892 262 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 C1orf61Q13536 156 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 GNA13Q14344 377 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 GPR19Q15760 415 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 DUSP7Q16829 419 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 CTU2Q2VPK5 515 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF750Q32MQ0 723 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 PRAMEF8Q5VWM4 474 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 PRAMEF7Q5VXH5 474 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 FRMPD2BQ6IN97 320 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF773Q6PK81 442 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 DGLUCYQ7Z3D6 616 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 SZRD1Q7Z422 152 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 GALNT5Q7Z7M9 940 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 CCDC116Q8IYX3 515 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 OR4N4Q8N0Y3 316 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF655Q8N720 491 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 TTC29Q8NA56 475 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 SMYD1Q8NB12 490 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 FAM46DQ8NEK8 389 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 GPR32P1Q8NGA4 272 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ZCCHC10Q8TBK6 192 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF566Q969W8 418 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 RERGQ96A58 199 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 C3orf14Q9HBI5 128 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 LYRM4Q9HD34 91 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 BCL2L10Q9HD36 194 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 DNAAF2Q9NVR5 837 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 MS4A12Q9NXJ0 267 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 TRPC4Q9UBN4 977 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 KCND3Q9UK17 655 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 POMT2Q9UKY4 750 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 BLOC1S6Q9UL45 172 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 NDRG4Q9ULP0 352 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 SH3GLB1Q9Y371 365 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 FAM32AQ9Y421 112 aaKnown RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 GPC6Q9Y625 555 aaPredicted RBP11.1□□□□□ -0.63
SMAD3-202ENST00000439724 COMMD3-BMI1R4GMX3 469 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 A0A1W2PS29 197 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 PRAMEF27A3QJZ7 478 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ARRDC5A6NEK1 342 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 FAM170BA6NMN3 283 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SOX1O00570 391 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ASNA1O43681 348 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SERPINB7O75635 380 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CSF2P04141 144 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 FESP07332 822 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 C8orf89P0DMQ9 161 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 NR2F1P10589 423 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ANXA8P13928 327 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ETS2P15036 469 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 IL9P15248 144 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 IL7RP16871 459 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ALOX12P18054 663 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CD38P28907 300 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 TTKP33981 857 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 YAP1P46937 504 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 KCNJ5P48544 419 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 PXNP49023 591 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CRISP3P54108 245 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CDH12P55289 794 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 LIM2P55344 173 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ESRRGP62508 458 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 RAPSNQ13702 412 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 RUNX2Q13950 521 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SIM2Q14190 667 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 PUM1Q14671 1186 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 DEFB134Q4QY38 66 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 BROXQ5VW32 411 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 LAIR2Q6ISS4 152 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ARMC6Q6NXE6 501 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 SLC44A2Q8IWA5 706 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-202ENST00000439724 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
SMAD3-202ENST00000439724 LGI4Q8N135 537 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms