RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 L3MBTL4Q8NA19 623 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PROKR2Q8NFJ6 384 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 OR2AP1Q8NGE2 309 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TM9SF4Q92544 642 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TBC1D20Q96BZ9 403 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 HYLS1Q96M11 299 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PAK6Q9NQU5 681 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 TAS2R7Q9NYW3 318 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 MGAT4BQ9UQ53 548 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 A0A1W2PPK0 400 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TMEM202A6NGA9 273 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SCN2BO60939 215 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 IL1AP01583 271 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SLC11A1P49279 550 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 KLHL22Q53GT1 634 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 MEDAGQ5VYS4 303 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TMEM220Q6QAJ8 160 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ARL9Q6T311 187 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 KLBQ86Z14 1044 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TMC8Q8IU68 726 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 FAM20CQ8IXL6 584 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PIAS4Q8N2W9 510 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 ZNF366Q8N895 744 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TMEM145Q8NBT3 493 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 OR4K5Q8NGD3 323 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 WRAP53Q9BUR4 548 aaKnown RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 RIOK2Q9BVS4 552 aaKnown RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 PRR14Q9BWN1 585 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SUV39H2Q9H5I1 410 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 DIABLOQ9NR28 239 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 GLTPQ9NZD2 209 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 STOX2Q9P2F5 926 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 PLAGL1Q9UM63 463 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ITM2BQ9Y287 266 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TRAPPC4Q9Y296 219 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ZNF646O15015 1829 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 CCDC88CQ9P219 2028 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PIKFYVEQ9Y2I7 2098 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 GLOD5A6NK44 160 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TEX46H3BTG2 121 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PLA2G10O15496 165 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 FRS3O43559 492 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 IGLV3-27P01718 113 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 EPHX1P07099 455 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 STOMP27105 288 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SOX18P35713 384 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CTSOP43234 321 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 XCR1P46094 333 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CRYBA2P53672 197 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SMIM11AP58511 58 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 HSDL2Q6YN16 418 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CHST9Q7L1S5 443 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 COMMD7Q86VX2 200 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CMTM8Q8IZV2 173 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PMEPA1Q969W9 287 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 C12orf66Q96MD2 445 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SIGLEC11Q96RL6 698 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 KATNB1Q9BVA0 655 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 MIXL1Q9H2W2 232 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 EGLN3Q9H6Z9 239 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CNIH4Q9P003 139 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 MRPL15Q9P015 296 aaKnown RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 CFAP97Q9P2B7 532 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 A0A0G2JMP0 313 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 H3BNC9 293 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 RFXAPO00287 272 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 C1QBP02746 253 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SYPP08247 313 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 OR12D1P0DN82 309 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 DRD5P21918 477 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ETV3P41162 512 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 MAPK8P45983 427 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 RFX3P48380 749 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ATP12AP54707 1039 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 MBTPS1Q14703 1052 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SEC23BQ15437 767 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 UNC5DQ6UXZ4 953 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 DCAF4L2Q8NA75 395 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ZNF740Q8NDX6 193 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 OR4F15Q8NGB8 312 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 OR52I1Q8NGK6 324 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 OR5D16Q8NGK9 328 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ZBED6CLQ96FA7 236 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 MAGEB10Q96LZ2 347 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 IL17FQ96PD4 163 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SLC22A12Q96S37 553 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 IQCMA0A1B0GVH7 501 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 RNASET2O00584 256 aaKnown RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 GAPDHSO14556 408 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 ARHGEF15O94989 841 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 PDGFAP04085 211 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 TRAPPC2P0DI81 140 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 TRAPPC2BP0DI82 140 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 POU3F3P20264 500 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 LHCGRP22888 699 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 MTNR1AP48039 350 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SMSP52788 366 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 TBPL1P62380 186 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms