RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 SNTNA6NMZ2 147 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 DLL1O00548 723 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SERPINI2O75830 405 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SLC22A5O76082 557 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 PRKAR1AP10644 381 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SLC2A2P11168 524 aaPredicted RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 DDX6P26196 483 aaKnown RBP eCLIP8.14□□□□□ -1.11
HPS4-206ENST00000439453 SLC7A9P82251 487 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 MLLT11Q13015 90 aaPredicted RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 TDGQ13569 410 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 NCF4Q15080 339 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GGTA1PQ4G0N0 100 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 CYP27C1Q4G0S4 372 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ZNF628Q5EBL2 1059 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GPRC6AQ5T6X5 926 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 MEDAGQ5VYS4 303 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 C22orf42Q6IC83 251 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ABI3BPQ7Z7G0 1075 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 LAS2Q8IYD9 372 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 RBFAQ8N0V3 343 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 NANOGP1Q8N7R0 232 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ARL14EPQ8N8R7 260 aaPredicted RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 PIH1D2Q8WWB5 315 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 UPRTQ96BW1 309 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ACAT2Q9BWD1 397 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 C1QTNF7Q9BXJ2 289 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GPR63Q9BZJ6 419 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ANKRA2Q9H9E1 313 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GALNT9Q9HCQ5 603 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 C12orf4Q9NQ89 552 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 THSD1Q9NS62 852 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 DNAJC27Q9NZQ0 273 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 TMCC3Q9ULS5 477 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 CORO2BQ9UQ03 480 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 PIKFYVEQ9Y2I7 2098 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 C1orf226A1L170 272 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 HEPACAM2A8MVW5 462 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 NPIPB8E9PQR5 432 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 F5H5T6 163 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 KDELR3O43731 214 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 PDGFBP01127 241 aaPredicted RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 HLA-DQB1P01920 261 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GSTM1P09488 218 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 FAM157BP0CG42 384 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ARSBP15848 533 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 NAGAP17050 411 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 CTRB1P17538 263 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 PPIBP23284 216 aaKnown RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 EVI2BP34910 448 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SLC9A3P48764 834 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GAB4Q2WGN9 574 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 CTRB2Q6GPI1 263 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 C1orf52Q8N6N3 182 aaKnown RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 FBXO32Q969P5 355 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 EID2BQ96D98 161 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 FCRL1Q96LA6 429 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GFM1Q96RP9 751 aaKnown RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 DUSP26Q9BV47 211 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 B3GNT4Q9C0J1 378 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ARL15Q9NXU5 204 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 OBP2AQ9NY56 170 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SMIM30A4D0T7 59 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 TLR4O00206 839 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 LYRM1O43325 122 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SLC43A1O75387 559 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GASTP01350 101 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 IGLV3-27P01718 113 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 SRFP11831 508 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 DDX5P17844 614 aaKnown RBP8.14□□□□□ -1.11
HPS4-206ENST00000439453 TNNI3P19429 210 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 RAB25P57735 213 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 GAB1Q13480 694 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 PAQR6Q6TCH4 344 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 MTSS1LQ765P7 747 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 Q8N402 240 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 AP2M1Q96CW1 435 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 PIP5K1AQ99755 562 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 MARVELD1Q9BSK0 173 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 RERGLQ9H628 205 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 POLHQ9Y253 713 aa8.14□□□□□ -1.11
HPS4-206ENST00000439453 ORC5O43913 435 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 GADD45GO95257 159 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 PRAMEF1O95521 474 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 SDC2P34741 201 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 LIMS1P48059 325 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 RPIAP49247 311 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 CASP9P55211 416 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 PER3P56645 1201 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 SNRPGP62308 76 aaKnown RBP8.13□□□□□ -1.11
HPS4-206ENST00000439453 ABATP80404 500 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 C1DQ13901 141 aaKnown RBP8.13□□□□□ -1.11
HPS4-206ENST00000439453 NFE2L1Q14494 772 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 FRG2Q64ET8 278 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 ZNF782Q6ZMW2 699 aaPredicted RBP8.13□□□□□ -1.11
HPS4-206ENST00000439453 SLC37A3Q8NCC5 494 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 PROKR2Q8NFJ6 384 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 TMEM203Q969S6 136 aa8.13□□□□□ -1.11
HPS4-206ENST00000439453 FRG2BQ96QU4 278 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms