RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LUZP2Q86TE4 346 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 IGDCC3Q8IVU1 814 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 TBC1D19Q8N5T2 526 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF441Q8N8Z8 693 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 GPATCH11Q8N954 259 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 MORN4Q8NDC4 146 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 NT5CQ8TCD5 201 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 UTP15Q8TED0 518 aaKnown RBP10.21□□□□□ -0.77
CSTF3-203ENST00000438862 CDKL2Q92772 493 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 ZNF669Q96BR6 464 aaPredicted RBP10.21□□□□□ -0.77
CSTF3-203ENST00000438862 SLC30A3Q99726 388 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 SFXN3Q9BWM7 321 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 REG4Q9BYZ8 158 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 RHBGQ9H310 441 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 CDC42EP4Q9H3Q1 356 aaKnown RBP10.21□□□□□ -0.77
CSTF3-203ENST00000438862 PIGMQ9H3S5 423 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 NSMCE4AQ9NXX6 385 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 NINJ2Q9NZG7 142 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 FETUBQ9UGM5 382 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 CLCA3PQ9Y6N3 262 aa10.21□□□□□ -0.77
CSTF3-203ENST00000438862 A0A087WUV0 522 aaPredicted RBP10.2□□□□□ -0.78
CSTF3-203ENST00000438862 A8MXE2 369 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 E5RI56 91 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 RIPK2O43353 540 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 OR1F1O43749 312 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 VAPBO95292 243 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 B3GALT4O96024 378 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 C1QAP02745 245 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 SERPIND1P05546 499 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 H2AFXP16104 143 aaPredicted RBP10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CRYGSP22914 178 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CCND1P24385 295 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 GPX6P59796 221 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 TBPL1P62380 186 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 RNF4P78317 190 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 MGAT5Q09328 741 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 ELAVL1Q15717 326 aaKnown RBP10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CLEC12BQ2HXU8 276 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 MPEG1Q2M385 716 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 TTLL9Q3SXZ7 439 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 BEND6Q5SZJ8 279 aaPredicted RBP10.2□□□□□ -0.78
CSTF3-203ENST00000438862 VASNQ6EMK4 673 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 MRNIPQ6NTE8 343 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 NEPROQ6NW34 567 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 STRA8Q7Z7C7 330 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 ANKMY2Q8IV38 441 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CNTN4Q8IWV2 1026 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 SCUBE1Q8IWY4 988 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 MAPK1IP1LQ8NDC0 245 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 PAQR8Q8TEZ7 354 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 DAZLQ92904 295 aaKnown RBP10.2□□□□□ -0.78
CSTF3-203ENST00000438862 FAM136AQ96C01 138 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CERS2Q96G23 380 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 WFIKKN1Q96NZ8 548 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 FAM167BQ9BTA0 163 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 PLAC1Q9HBJ0 212 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 SH2D2AQ9NP31 389 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 PRTFDC1Q9NRG1 225 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CNIH4Q9P003 139 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 CAMK2AQ9UQM7 478 aa10.2□□□□□ -0.78
CSTF3-203ENST00000438862 TCRBV9S1A1TA0A576 114 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 TRBC2A0A5B9 178 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 FAM159BA6NKW6 160 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 SPRY1O43609 319 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-203ENST00000438862 BANF1O75531 89 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 SIX3O95343 332 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-203ENST00000438862 NUDT17P0C025 328 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 MPC1LP0DKB6 136 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 SMIM10L1P0DMW3 83 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 CDH1P12830 882 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 OGNP20774 298 aaKnown RBP10.19□□□□□ -0.78
CSTF3-203ENST00000438862 ARNTP27540 789 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 SSTR1P30872 391 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 IDUAP35475 653 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 CCR8P51685 355 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 NR1H2P55055 460 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 THOC5Q13769 683 aaKnown RBP10.19□□□□□ -0.78
CSTF3-203ENST00000438862 VEZF1Q14119 521 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 RCAN2Q14206 197 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 RASA2Q15283 850 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 PIGGQ5H8A4 983 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 NHSL2Q5HYW2 709 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 LCTLQ6UWM7 567 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 C1orf229Q6ZS94 237 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-203ENST00000438862 BTLAQ7Z6A9 289 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 CROCCP2Q86T23 111 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 CA13Q8N1Q1 262 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 ABHD11Q8NFV4 315 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 OR4K1Q8NGD4 311 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 ZPLD1Q8TCW7 415 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 LPGAT1Q92604 370 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 SMIM10Q96HG1 83 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 TM9SF2Q99805 663 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 ACBD3Q9H3P7 528 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 ACSS3Q9H6R3 686 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 LRTM1Q9HBL6 345 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 C20orf96Q9NUD7 363 aaPredicted RBP10.19□□□□□ -0.78
CSTF3-203ENST00000438862 KLHL42Q9P2K6 505 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 GALPQ9UBC7 116 aa10.19□□□□□ -0.78
CSTF3-203ENST00000438862 ZFP69BQ9UJL9 534 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms