RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PATE1Q8WXA2 126 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 RAB8BQ92930 207 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF566Q969W8 418 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 NMD3Q96D46 503 aaKnown RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 KLHDC7BQ96G42 594 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 APOL4Q9BPW4 351 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 MAPKAP1Q9BPZ7 522 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 ORAI3Q9BRQ5 295 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 OR51I1Q9H343 314 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 PRDM9Q9NQV7 894 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 RSL24D1Q9UHA3 163 aaKnown RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 PHF11Q9UIL8 331 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 SH3GLB1Q9Y371 365 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 E9PQ18 207 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 IFNW1P05000 195 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 FHP07954 510 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 NR2F6P10588 404 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 ANXA8P13928 327 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 CTSEP14091 401 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 IL7RP16871 459 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 IL1RL1Q01638 556 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 RAPSNQ13702 412 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 DUSP7Q16829 419 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF605Q86T29 641 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 PARGQ86W56 976 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 MIPOL1Q8TD10 442 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 SLC37A2Q8TED4 501 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 APOBEC4Q8WW27 367 aaKnown RBP24.26■■□□□ 1.47
CPNE1-216ENST00000437340 RSC1A1Q92681 617 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 SERINC2Q96SA4 455 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 ZFYVE21Q9BQ24 234 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 TUBA1CQ9BQE3 449 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 PSD2Q9BQI7 771 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 GABARAPL3Q9BY60 117 aa24.26■■□□□ 1.47
CPNE1-216ENST00000437340 OR12D1P0DN82 309 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 ETS2P15036 469 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF10P21506 573 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 MATN1P21941 496 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 PPP2R1BP30154 601 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 BUD31P41223 144 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 SIM2Q14190 667 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 MICAQ29983 383 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 RPS26P11Q5JNZ5 115 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 KCTD8Q6ZWB6 473 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 TSPYL5Q86VY4 417 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 CCDC116Q8IYX3 515 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 SAMD14Q8IZD0 417 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF681Q96N22 645 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 PITX2Q99697 317 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 VCX3AQ9NNX9 186 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 GMPPBQ9Y5P6 360 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF780BQ9Y6R6 833 aa24.25■■□□□ 1.47
CPNE1-216ENST00000437340 ARHGEF17Q96PE2 2063 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-216ENST00000437340 IGHV1OR15-9A0A0B4J2B8 117 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 A0A0J9YVX5 310 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 A0A0J9YY10 115 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF701M0R085 212 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-216ENST00000437340 ABCB7O75027 752 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 SERPINB7O75635 380 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 CPNE6O95741 557 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 JUNBP17275 347 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-216ENST00000437340 LIMS1P48059 325 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 CDH12P55289 794 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 PRR5P85299 388 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 NPRL3Q12980 569 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 CDK5R2Q13319 367 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 GNA13Q14344 377 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 LAIR2Q6ISS4 152 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 SLC44A2Q8IWA5 706 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-216ENST00000437340 OR10G2Q8NGC3 310 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 BAHD1Q8TBE0 780 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-216ENST00000437340 ZFAND2BQ8WV99 257 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 PROX1Q92786 737 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 CHRDQ9H2X0 955 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 GOLGA4Q13439 2230 aaKnown RBP24.24■■□□□ 1.47
CPNE1-216ENST00000437340 STK25O00506 426 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 B4GAT1O43505 415 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 SLC28A2O43868 658 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 RECKO95980 971 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 CELA2BP08218 269 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-216ENST00000437340 CXCR4P61073 352 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 IL5RAQ01344 420 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 MANEAQ5SRI9 462 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 ABHD13Q7L211 337 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 SZRD1Q7Z422 152 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 POLR1BQ9H9Y6 1135 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 HRASLS2Q9NWW9 162 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 KCND3Q9UK17 655 aa24.24■■□□□ 1.47
CPNE1-216ENST00000437340 VCANP13611 3396 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 SLC1A7O00341 560 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 ZSCAN9O15535 394 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-216ENST00000437340 EMC8O43402 210 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 FEN1P39748 380 aaKnown RBP24.23■■□□□ 1.47
CPNE1-216ENST00000437340 KCNJ5P48544 419 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 TNFRSF17Q02223 184 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF542PQ5EBM4 170 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 GJD3Q8N144 294 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 ZNF655Q8N720 491 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-216ENST00000437340 XAGE5Q8WWM1 108 aa24.23■■□□□ 1.47
CPNE1-216ENST00000437340 CNDP2Q96KP4 475 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms