RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 MARK4Q96L34 752 aa13.77□□□□□ -0.21
SKA2-202ENST00000437036 EPN3Q9H201 632 aa13.77□□□□□ -0.21
SKA2-202ENST00000437036 RABEP2Q9H5N1 569 aa13.77□□□□□ -0.21
SKA2-202ENST00000437036 ZNF160Q9HCG1 818 aa13.77□□□□□ -0.21
SKA2-202ENST00000437036 ATP13A2Q9NQ11 1180 aa13.77□□□□□ -0.21
SKA2-202ENST00000437036 SDR39U1Q9NRG7 319 aaPredicted RBP13.77□□□□□ -0.21
SKA2-202ENST00000437036 EXO1Q9UQ84 846 aaKnown RBP13.77□□□□□ -0.21
SKA2-202ENST00000437036 CLDN16Q9Y5I7 305 aa13.77□□□□□ -0.21
SKA2-202ENST00000437036 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 ARGFXA6NJG6 315 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 C17orf105B2RV13 164 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 ATP1B1P05026 303 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 ATP4BP51164 291 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 PGDP52209 483 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 NCBP2P52298 156 aaKnown RBP eCLIP13.76□□□□□ -0.21
SKA2-202ENST00000437036 UFM1P61960 85 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 AIMP2Q13155 320 aaKnown RBP13.76□□□□□ -0.21
SKA2-202ENST00000437036 SQLEQ14534 574 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 DCAF10Q5QP82 559 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 ANKRD26P1Q6NSI1 321 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 GALNT12Q8IXK2 581 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 CCDC116Q8IYX3 515 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 MORN4Q8NDC4 146 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 VPS37AQ8NEZ2 397 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 OR7A2PQ8NGA2 310 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
SKA2-202ENST00000437036 TESCQ96BS2 214 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 COQ8BQ96D53 544 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 ZNF681Q96N22 645 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 BHLHE41Q9C0J9 482 aaPredicted RBP13.76□□□□□ -0.21
SKA2-202ENST00000437036 TMEM45AQ9NWC5 275 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 ACACBO00763 2458 aa13.76□□□□□ -0.21
SKA2-202ENST00000437036 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 DMXL2Q8TDJ6 3036 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 SCN2AQ99250 2005 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ANKRD11Q6UB99 2663 aaPredicted RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ANKRD28O15084 1053 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 SNX3O60493 162 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 SLITRK5O94991 958 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 S100A3P33764 101 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 KIR3DL1P43629 444 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 MRPL19P49406 292 aaKnown RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 MANFP55145 182 aaKnown RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 SLC26A5P58743 744 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 CEBPEQ15744 281 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 SPRED3Q2MJR0 410 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 BTBD16Q32M84 506 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ZNF750Q32MQ0 723 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ANXA8L1Q5VT79 327 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 CPZQ66K79 652 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 PLAG1Q6DJT9 500 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 FAM180BQ6P0A1 224 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 CAMKMTQ7Z624 323 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 KBTBD2Q8IY47 623 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 B3GNT7Q8NFL0 401 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 M1APQ8TC57 530 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 PTPMT1Q8WUK0 201 aaPredicted RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 SNRNP27Q8WVK2 155 aaKnown RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 C10orf82Q8WW14 230 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 WDR77Q9BQA1 342 aaPredicted RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 MESP1Q9BRJ9 268 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 DUSP26Q9BV47 211 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ING2Q9H160 280 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 CLMPQ9H6B4 373 aa13.75□□□□□ -0.21
SKA2-202ENST00000437036 ACSS1Q9NUB1 689 aaPredicted RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.75□□□□□ -0.21
SKA2-202ENST00000437036 COPG1Q9Y678 874 aaKnown RBP13.75□□□□□ -0.21
SKA2-202ENST00000437036 A0A1W2PRB8 838 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 A0A1W2PS29 197 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
SKA2-202ENST00000437036 IL6P05231 212 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 SERPINA7P05543 415 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 LAMP1P11279 417 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 GPX3P22352 226 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 GPC1P35052 558 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 MAP4K2Q12851 820 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 ZNF267Q14586 743 aaPredicted RBP13.74□□□□□ -0.21
SKA2-202ENST00000437036 ZNF385BQ569K4 471 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 JMJD6Q6NYC1 403 aaPredicted RBP13.74□□□□□ -0.21
SKA2-202ENST00000437036 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 APLFQ8IW19 511 aaPredicted RBP13.74□□□□□ -0.21
SKA2-202ENST00000437036 VWA5B2Q8N398 1253 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 OR8J2Q8NGG1 315 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 CIDECQ96AQ7 238 aaPredicted RBP13.74□□□□□ -0.21
SKA2-202ENST00000437036 VMP1Q96GC9 406 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 SENP5Q96HI0 755 aaPredicted RBP13.74□□□□□ -0.21
SKA2-202ENST00000437036 FBXL20Q96IG2 436 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 AMDHD1Q96NU7 426 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 CNPPD1Q9BV87 410 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 OR8D2Q9GZM6 311 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 GLIPR2Q9H4G4 154 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 CXorf21Q9HAI6 301 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 MMP25Q9NPA2 562 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 PCDHGB4Q9UN71 923 aa13.74□□□□□ -0.21
SKA2-202ENST00000437036 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms