RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PCOLCE2Q9UKZ9 415 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NDRG4Q9ULP0 352 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PPM1HQ9ULR3 514 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 MT-CYBP00156 380 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GABRR2P28476 465 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 BDKRB1P46663 353 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GSK3AP49840 483 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 HMGA2P52926 109 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 BTG1P62324 171 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GPLD1P80108 840 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TUBB3Q13509 450 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF782Q6ZMW2 699 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC103Q8IW40 242 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CANT1Q8WVQ1 401 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TMBIM1Q969X1 311 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PHF21BQ96EK2 531 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 IFT27Q9BW83 186 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ACTRT3Q9BYD9 372 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PCDHAC1Q9H158 963 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DDX31Q9H8H2 851 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SLC25A19Q9HC21 320 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GGT7Q9UJ14 662 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DGKBQ9Y6T7 804 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TRBV5-3A0A0A0MS03 114 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC163A0A0D9SF12 145 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ACOT8O14734 319 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NADKO95544 446 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ITGBL1O95965 494 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 C1QAP02745 245 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ALPPL2P10696 532 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GTF2E2P29084 291 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NUBP1P53384 320 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CTBP2P56545 445 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 C1QTNF8P60827 252 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CYP27C1Q4G0S4 372 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF613Q6PF04 617 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CBLL1Q75N03 491 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DTWD1Q8N5C7 304 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 HORMAD2Q8N7B1 307 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SMAP2Q8WU79 429 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RNFT2Q96EX2 444 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 GIMAP5Q96F15 307 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 TXNDC15Q96J42 360 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SLC35A5Q9BS91 424 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DUSP23Q9BVJ7 150 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 B3GNT4Q9C0J1 378 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 MTHFD2LQ9H903 347 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 STOX2Q9P2F5 926 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 AASSQ9UDR5 926 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 EIF2B4Q9UI10 523 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 INTS6Q9UL03 887 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CAB39Q9Y376 341 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 OR6C70A6NIJ9 312 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PLD2O14939 933 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 HIST1H2ABP04908 130 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SERPIND1P05546 499 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PPM1FP49593 454 aaPredicted RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 PRKCZQ05513 592 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 C16orf72Q14CZ0 275 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 SPCS2Q15005 226 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 RPL22L1Q6P5R6 122 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 NXPE4Q6UWF7 544 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 HIST3H2AQ7L7L0 130 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 HIST1H2ACQ93077 130 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 HAPLN2Q9GZV7 340 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DPEP3Q9H4B8 488 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 CCSER2Q9H7U1 834 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 FAIMQ9NVQ4 179 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 ACTR10Q9NZ32 417 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 KCND3Q9UK17 655 aa3.59□□□□□ -1.83
SHPRH-205ENST00000433355 DIMT1Q9UNQ2 313 aaKnown RBP3.59□□□□□ -1.83
SHPRH-205ENST00000433355 C2orf74A8MZ97 194 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF780AO75290 641 aaPredicted RBP3.59□□□□□ -1.84
SHPRH-205ENST00000433355 MTHFD2P13995 350 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 GABRA5P31644 462 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 CSKP41240 450 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 CCT3P49368 545 aaKnown RBP3.59□□□□□ -1.84
SHPRH-205ENST00000433355 FAM53BQ14153 422 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 GBX1Q14549 363 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 PTPRCAPQ14761 206 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 ADPRMQ3LIE5 342 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM201Q5SNT2 666 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 ANKRD26P1Q6NSI1 321 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 ULK3Q6PHR2 472 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 RBM44Q6ZP01 1051 aaKnown RBP3.59□□□□□ -1.84
SHPRH-205ENST00000433355 IGDCC3Q8IVU1 814 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 GALNT4Q8N4A0 578 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM80Q96HE8 168 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 MED30Q96HR3 178 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 UGT1A7Q9HAW7 530 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 ABRACLQ9P1F3 81 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 I6L893 689 aaPredicted RBP3.59□□□□□ -1.84
SHPRH-205ENST00000433355 CLDN5O00501 218 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 SMAD6O43541 496 aaKnown RBP3.59□□□□□ -1.84
SHPRH-205ENST00000433355 RDH16O75452 317 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 SC5DO75845 299 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 SSTR3P32745 418 aaPredicted RBP3.59□□□□□ -1.84
SHPRH-205ENST00000433355 BMP8BP34820 402 aa3.59□□□□□ -1.84
SHPRH-205ENST00000433355 GBX2P52951 348 aaPredicted RBP3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms