RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 GSTA2P09210 222 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZSCAN5DPP0CG00 497 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 TSPY4P0CV99 314 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 TSPY10P0CW01 314 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 PTMSP20962 102 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRDX6P30041 224 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 MMP12P39900 470 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 TSFMP43897 325 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 PRELPP51888 382 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 GEMP55040 296 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 NLRP11P59045 1033 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 RPL27P61353 136 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 SPP2Q13103 211 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 KRT81Q14533 505 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 RFTN2Q52LD8 501 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 GPAT3Q53EU6 434 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 FASTKD1Q53R41 847 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 TAF1BQ53T94 588 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 DNAJC21Q5F1R6 531 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 C1orf189Q5VU69 101 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 LIPJQ5W064 366 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 HIST2H2AA3Q6FI13 130 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 RHBDD2Q6NTF9 364 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 CDC42EP5Q6NZY7 148 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 UNC5DQ6UXZ4 953 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 KIF6Q6ZMV9 814 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 GPR142Q7Z601 462 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 AMZ2Q86W34 360 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 PARP8Q8N3A8 854 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZBTB44Q8NCP5 570 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR6F1Q8NGZ6 308 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 RPLP0P6Q8NHW5 317 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATP8B4Q8TF62 1192 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 U2AF1L4Q8WU68 220 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 DNASE2BQ8WZ79 361 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 TAF4BQ92750 862 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 CCDC51Q96ER9 411 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 MAGED4Q96JG8 741 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 RPGRIP1Q96KN7 1286 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ACCSQ96QU6 501 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 FUNDC2Q9BWH2 189 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 NMNAT2Q9BZQ4 307 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 IL1RAPQ9NPH3 570 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 HOMER3Q9NSC5 361 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 LHX3Q9UBR4 397 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 MRTO4Q9UKD2 239 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 VWDEQ8N2E2 1590 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 UGGT1Q9NYU2 1555 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 A2MP01023 1474 aa2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 DNMT1P26358 1616 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 RNF17Q9BXT8 1623 aaKnown RBP2.64□□□□□ -1.99
HMGB1P27-201ENST00000431429 ABCC3O15438 1527 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 KDM5CP41229 1560 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 SETBP1Q9Y6X0 1596 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 RGS12O14924 1447 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 TRBV5-4A0A0C4DH59 114 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 OR5H15A6NDH6 313 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 TCP10L2B9ZVM9 353 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 K7EQG2 157 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 KIAA0513O60268 411 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 MAGEC1O60732 1142 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ATP6V1G1O75348 118 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF821O75541 412 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 NXPH2O95156 264 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 HPRP00739 348 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 RPLP0P05388 317 aaKnown RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 FCER2P06734 321 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ARF4P18085 180 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 IL4RP24394 825 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 FCGR2BP31994 310 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 FCGR2CP31995 323 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 CHRNA3P32297 505 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ACAA2P42765 397 aaKnown RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 MTIF2P46199 727 aaKnown RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 NDST1P52848 882 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 NDST2P52849 883 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 CRIP2P52943 208 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 SNRPD1P62314 119 aaKnown RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 GABPB1Q06547 395 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 CALCOCO2Q13137 446 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 SNX1Q13596 522 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 LY6DQ14210 128 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 CEBPEQ15744 281 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 MLF2Q15773 248 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 UPP1Q16831 310 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 SGSM1Q2NKQ1 1148 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 LRIT3Q3SXY7 679 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ACSF3Q4G176 576 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 KLHL22Q53GT1 634 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 AGKQ53H12 422 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 CES4AQ5XG92 561 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ISLR2Q6UXK2 745 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 FAM43BQ6ZT52 329 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 BNIPLQ7Z465 357 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 DEFB132Q7Z7B7 95 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZER1Q7Z7L7 766 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ADCK1Q86TW2 530 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZNF519Q8TB69 540 aa2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P27-201ENST00000431429 TMEM45BQ96B21 275 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms