RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 CSO75390 466 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 ADRB3P13945 408 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SOX3P41225 446 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 FRKP42685 505 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 KCNJ5P48544 419 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 XKP51811 444 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 KRR1Q13601 381 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SPDYE7PQ495Y7 208 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 C9orf64Q5T6V5 341 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 PGBD2Q6P3X8 592 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 NATD1Q8N6N6 113 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SCAIQ8N9R8 606 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 ZFPM2Q8WW38 1151 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 PIK3R3Q92569 461 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 TFGQ92734 400 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 EFHD2Q96C19 240 aaPredicted RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC6A18Q96N87 628 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 AIF1LQ9BQI0 150 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SEMA3GQ9NS98 782 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 WBP11Q9Y2W2 641 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SNX11Q9Y5W9 270 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 PRRT4C9JH25 899 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 H3BN98 237 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 ERGP11308 486 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 DEFA1P59665 94 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 DEFA3P59666 94 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 DMPKQ09013 629 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 CNTN1Q12860 1018 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC34A3Q8N130 599 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 MRPL43Q8N983 215 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 TMIEQ8NEW7 156 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 OR8D1Q8WZ84 308 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 EXOSC8Q96B26 276 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 TMEM80Q96HE8 168 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC30A2Q9BRI3 323 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 CNPPD1Q9BV87 410 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 ASPNQ9BXN1 380 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 SERHL2Q9H4I8 314 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 PELI2Q9HAT8 420 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 EXOSC4Q9NPD3 245 aaKnown RBP12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 LHX9Q9NQ69 397 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
SNRNP200-202ENST00000429650 FEZF1A0PJY2 475 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 FAM25EA8MYX2 175 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 HOXD12P35452 270 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 ZNF91Q05481 1191 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 NCF4Q15080 339 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SPHARQ15513 63 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 LRIT3Q3SXY7 679 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CASP12Q6UXS9 341 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC7A13Q8TCU3 470 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CEP19Q96LK0 163 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 TEFMQ96QE5 360 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 FUZQ9BT04 418 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CCDC32Q9BV29 185 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 POLR2J3Q9H1A7 115 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SMURF1Q9HCE7 757 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 DYRK4Q9NR20 520 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC27A6Q9Y2P4 619 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CKAP5Q14008 2032 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 PDZK1P1A8MUH7 402 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CACNB4O00305 520 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 TMPRSS11DO60235 418 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CEBPBP17676 345 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 CD72P21854 359 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 PSMB5P28074 263 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 RPS19P39019 145 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 HNRNPA1L2Q32P51 320 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 FNDC3BQ53EP0 1204 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 BCDIN3DQ7Z5W3 292 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 GRASPQ7Z6J2 395 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 PLA2G15Q8NCC3 412 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 OR8J1Q8NGP2 316 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 ZNF607Q96SK3 696 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 C3orf14Q9HBI5 128 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 WASH6PQ9NQA3 447 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 C14orf119Q9NWQ9 140 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 ERVK13-1Q9NX77 482 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 TEX10Q9NXF1 929 aaPredicted RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 FBXL12Q9NXK8 326 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SEC14L3Q9UDX4 400 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC23A2Q9UGH3 650 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 RPL36Q9Y3U8 105 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 HEATR5BQ9P2D3 2071 aa12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 KIAA0100Q14667 2235 aaKnown RBP12.61□□□□□ -0.39
SNRNP200-202ENST00000429650 PRAMEF27A3QJZ7 478 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 ASNA1O43681 348 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 SLC28A2O43868 658 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 SSX4O60224 188 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TP53P04637 393 aaPredicted RBP12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 HBQ1P09105 142 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CXCR2P25025 360 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 TNFSF8P32971 234 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CASP3P42574 277 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CRYBB2P43320 205 aa12.6□□□□□ -0.39
SNRNP200-202ENST00000429650 CCT3P49368 545 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms