RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 FAM20CQ8IXL6 584 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 CCDC116Q8IYX3 515 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 OR52P1PQ8NH57 321 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.08□□□□□ -0.324e-6■□□□□ 10
SGMS1-203ENST00000429490 PADI2Q9Y2J8 665 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.32
SGMS1-203ENST00000429490 MMP20O60882 483 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 C1SP09871 688 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SDHBP21912 280 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 HLA-FP30511 346 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SMSP52788 366 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 WNT3P56703 355 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 PCDH1Q08174 1060 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 CDC20Q12834 499 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 MAB21L1Q13394 359 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SUZ12Q15022 739 aaKnown RBP13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SLC30A6Q6NXT4 461 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 IL20RBQ6UXL0 311 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 MSANTD1Q6ZTZ1 278 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 WDR53Q7Z5U6 358 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-203ENST00000429490 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 HORMAD2Q8N7B1 307 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 QRFPRQ96P65 431 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
SGMS1-203ENST00000429490 MAT2BQ9NZL9 334 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SPTBP11277 2137 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 LEFTY2O00292 366 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 SAGP10523 405 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 TYRP14679 529 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 IMPA1P29218 277 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 BNC1Q01954 994 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 LINC00299Q6ZSB3 139 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 MTSS1LQ765P7 747 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 ZNF433Q8N7K0 673 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 ZNF557Q8N988 423 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 SMG7Q92540 1137 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 BHLHE41Q9C0J9 482 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 TMEM189-UBE2V1I3L0A0 370 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 OR5F1O95221 314 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 MRPL3P09001 348 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 HMGA1P17096 107 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 VIPR1P32241 457 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 RPL6Q02878 288 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 FXNQ16595 210 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 UBQLNLQ8IYU4 475 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 SAMD12Q8N8I0 201 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 ZSCAN5AQ9BUG6 496 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 SPATA5L1Q9BVQ7 753 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 ABCG5Q9H222 651 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 XKR8Q9H6D3 395 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 ZNF334Q9HCZ1 680 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 P2RX2Q9UBL9 471 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 PARP14Q460N5 1801 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 H3BSH0 61 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 GNB5O14775 395 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 ADAP00813 363 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 GPR4P46093 362 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 RPS25P62851 125 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 SP3Q02447 781 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 LRRC32Q14392 662 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 OR9A1PQ8NGU1 263 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 LRRC20Q8TCA0 184 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 UBTD2Q8WUN7 234 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 SLC38A5Q8WUX1 472 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 TFGQ92734 400 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 RELTQ969Z4 430 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 GABARAPL1Q9H0R8 117 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 EGLN3Q9H6Z9 239 aa13.07□□□□□ -0.32
SGMS1-203ENST00000429490 MRPL39Q9NYK5 338 aaKnown RBP13.07□□□□□ -0.32
SGMS1-203ENST00000429490 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 TSPAN4O14817 238 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 HOXC11O43248 304 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-203ENST00000429490 LATO43561 262 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 FZD6O60353 706 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 SLC35G4P0C7Q5 338 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 MTAPQ13126 283 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 CDK10Q15131 360 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 BCL2L15Q5TBC7 163 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 FAM92BQ6ZTR7 304 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 RASGEF1AQ8N9B8 481 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 NLGN4YQ8NFZ3 816 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-203ENST00000429490 OR4F15Q8NGB8 312 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 OR5H6Q8NGV6 325 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
SGMS1-203ENST00000429490 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 TXNL4BQ9NX01 149 aaKnown RBP13.06□□□□□ -0.32
SGMS1-203ENST00000429490 EIF3KQ9UBQ5 218 aaKnown RBP13.06□□□□□ -0.32
SGMS1-203ENST00000429490 NAALAD2Q9Y3Q0 740 aa13.06□□□□□ -0.32
SGMS1-203ENST00000429490 EEF1E1O43324 174 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms