RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PCDHA9Q9Y5H5 950 aa13.79□□□□□ -0.2
SYNGAP1-203ENST00000428982 PAICSP22234 425 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 GPRIN1Q7Z2K8 1008 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR10Q1Q8NGQ4 319 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 AUTS2Q8WXX7 1259 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 TMEM203Q969S6 136 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PSMG2Q969U7 264 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 RAD9AQ99638 391 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PKMYT1Q99640 499 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ARL6Q9H0F7 186 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF275Q9NSD4 429 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 NUDT15Q9NV35 164 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PPP4R1LQ9P1A2 415 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 TINAGQ9UJW2 476 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 USP22Q9UPT9 525 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SNAPC5O75971 98 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 VIPP01282 170 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 RHCEP18577 417 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC6A4P31645 630 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 CDKN2CP42773 168 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PTGER3P43115 390 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 FAM189BP81408 668 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC9A5Q14940 896 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ANKRD34AQ69YU3 496 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC25A25Q6KCM7 469 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PAQR3Q6TCH7 311 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PTCHD4Q6ZW05 846 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PTRH1Q86Y79 214 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SVBPQ8N300 66 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 IL17RCQ8NAC3 791 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 KREMEN2Q8NCW0 462 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR4K2Q8NGD2 314 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF382Q96SR6 550 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SCP2D1Q9UJQ7 156 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 MYO18AQ92614 2054 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR4F21O95013 312 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 FGF19O95750 216 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 C8AP07357 584 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 BTF3P20290 206 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 HOXC13P31276 330 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ACSL1P33121 698 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 RPL38P63173 70 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PSPHP78330 225 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 OR51M1Q9H341 326 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 MRPS23Q9Y3D9 190 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC22A23A1A5C7 686 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ALDOBP05062 364 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SBK3P0C264 359 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 HPGDP15428 266 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SH3BP2P78314 561 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC3A1Q07837 685 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PON3Q15166 354 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 TOR1AIP1Q5JTV8 583 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 TFAP2EQ6VUC0 442 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 PIM3Q86V86 326 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZSCAN1Q8NBB4 408 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 BABAM2Q9NXR7 383 aa13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 OAS3Q9Y6K5 1087 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-203ENST00000428982 CITO14578 2027 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 TCRBV5S2A0A599 114 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 SIX6O95475 246 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 LY86O95711 162 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 CD2P06729 351 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 MC4RP32245 332 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 CDKN2DP55273 166 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 RNASE12Q5GAN4 147 aaKnown RBP13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 LAMTOR1Q6IAA8 161 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 TCEAL6Q6IPX3 200 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC27A4Q6P1M0 643 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 PGAP1Q75T13 922 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 FUNDC1Q8IVP5 155 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 IGFLR1Q9H665 355 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 ERVW-1Q9UQF0 538 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 SLC6A5Q9Y345 797 aa13.77□□□□□ -0.2
SYNGAP1-203ENST00000428982 ZNF197O14709 1029 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 FPGTO14772 594 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 CKMT1AP12532 417 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 EPB42P16452 691 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 FPR1P21462 350 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 GPR15P49685 360 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 DIO3P55073 304 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 CLDN20P56880 219 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 UFM1P61960 85 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 VASNQ6EMK4 673 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 MRPL48Q96GC5 212 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 SLC38A2Q96QD8 506 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 APEX1P27695 318 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 NPRL3Q12980 569 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 MICAQ29983 383 aa13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 RTN4RL1Q86UN2 441 aaPredicted RBP13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 CMSS1Q9BQ75 279 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 ZCCHC2Q9C0B9 1178 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 TSR3Q9UJK0 312 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-203ENST00000428982 DLGAP4Q9Y2H0 992 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms