RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 CSRP2Q16527 193 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 PRSS53Q2L4Q9 553 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 DEFB110Q30KQ9 67 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 SPDYE7PQ495Y7 208 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 FAM98BQ52LJ0 330 aaKnown RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 AP1ARQ63HQ0 302 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 C18orf63Q68DL7 685 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ZNF574Q6ZN55 896 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 QSOX2Q6ZRP7 698 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 IFNEQ86WN2 208 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ADGRG5Q8IZF4 528 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ST13P4Q8IZP2 240 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 MMP21Q8N119 569 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 HIPK4Q8NE63 616 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 RASSF5Q8WWW0 418 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ELP4Q96EB1 424 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 LRFN5Q96NI6 719 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 MS4A4EQ96PG1 132 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 MKKSQ9NPJ1 570 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 TMEM9BQ9NQ34 198 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 FSCN3Q9NQT6 498 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ZCCHC3Q9NUD5 404 aaKnown RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 C14orf105Q9NVL8 296 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 GPATCH2Q9NW75 528 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 CALML5Q9NZT1 146 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 CNOT11Q9UKZ1 510 aaKnown RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 ANGPT4Q9Y264 503 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 R4GN57 208 aa8.53□□□□□ -1.04
NR1I3-209ENST00000428574 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
NR1I3-209ENST00000428574 MDC1Q14676 2089 aaKnown RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 TTC28Q96AY4 2481 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 IGLV3-12A0A075B6K2 115 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 B4E171 279 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 H0YJX3 145 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SGK494L7N484 410 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PCDH17O14917 1159 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 DPM1O60762 260 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 COQ9O75208 318 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 AK1P00568 194 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 STATHP02808 62 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CD59P13987 128 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 FOLR1P15328 257 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 VHLP40337 213 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 TSPAN7P41732 249 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CRATP43155 626 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 MAGEA2P43356 314 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PRIM2P49643 509 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CDK9P50750 372 aaKnown RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PCBP3P57721 371 aaKnown RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PSPHP78330 225 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SHC2P98077 582 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 FOLH1Q04609 750 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 MAP4K2Q12851 820 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 TP53BP2Q13625 1128 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 MYBPC3Q14896 1274 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 GPR19Q15760 415 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 LPAL2Q16609 132 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CRB2Q5IJ48 1285 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 EIF3MQ7L2H7 374 aaKnown RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PRSS41Q7RTY9 318 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 ZNF551Q7Z340 670 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 C6orf120Q7Z4R8 191 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 GLRX5Q86SX6 157 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SPPL2CQ8IUH8 684 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 NAXDQ8IW45 347 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 ADCY4Q8NFM4 1077 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 OIT3Q8WWZ8 545 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 PYDC1Q8WXC3 89 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 HOXB13Q92826 284 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 FAM162AQ96A26 154 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 MMABQ96EY8 250 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SLC35G5Q96KT7 338 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CCDC74BQ96LY2 380 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 CSF3RQ99062 836 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 ZPBPQ9BS86 351 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 EDEM2Q9BV94 578 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 SPATA5L1Q9BVQ7 753 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 BTBD2Q9BX70 525 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 OSBPL10Q9BXB5 764 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 TMEM121BQ9BXQ6 578 aaPredicted RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 VCXQ9H320 206 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 EVA1AQ9H8M9 152 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 ZNF304Q9HCX3 659 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 BCL2L10Q9HD36 194 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 FBXO8Q9NRD0 319 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 DDX18Q9NVP1 670 aaKnown RBP8.52□□□□□ -1.05
NR1I3-209ENST00000428574 IRAK4Q9NWZ3 460 aa8.52□□□□□ -1.05
NR1I3-209ENST00000428574 ADPRHL2Q9NX46 363 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms