RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GATCO43716 136 aaKnown RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 GCM2O75603 506 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 ADAP00813 363 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HIST1H2AGP0C0S8 130 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 OSMP13725 252 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HIST1H2ADP20671 130 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 PRPS1L1P21108 318 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 ETV5P41161 510 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 RFX3P48380 749 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 WNT3P56703 355 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 ILKQ13418 452 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 TCTE1Q5JU00 501 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HIST2H2AA3Q6FI13 130 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 PAQR7Q86WK9 346 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 LRRC28Q86X40 367 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 CDC26Q8NHZ8 85 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 CMTM7Q96FZ5 175 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HIST1H2AHQ96KK5 128 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 HIST1H2AJQ99878 128 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 DNTTIP1Q9H147 329 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 FN3KQ9H479 309 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 NSUN3Q9H649 340 aaKnown RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 NMNAT1Q9HAN9 279 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-206ENST00000428313 CRTAC1Q9NQ79 661 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 ELOVL2Q9NXB9 296 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 EPHA6Q9UF33 1036 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 SLC6A5Q9Y345 797 aa15.31■□□□□ 0.04
C9orf3-206ENST00000428313 A0A0B4J203 849 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 TRAV20A0A0B4J274 112 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 PLSCR5A0PG75 271 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 L7N2F9 121 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 KPNA3O00505 521 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 SLC28A2O43868 658 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 GADD45GO95257 159 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 GASTP01350 101 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 SYPP08247 313 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 NUDT7P0C024 238 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 KCNJ5P48544 419 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 HNMTP50135 292 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 SMSP52788 366 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 HFEQ30201 348 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 ZNF770Q6IQ21 691 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 FIP1L1Q6UN15 594 aaKnown RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 CASP12Q6UXS9 341 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 PRICKLE2Q7Z3G6 844 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 TEX47Q8TBZ9 253 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 SLC5A11Q8WWX8 675 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 LRRC46Q96FV0 321 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 SPATA5L1Q9BVQ7 753 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 TMPRSS13Q9BYE2 586 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 METTL17Q9H7H0 456 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 SLAMF7Q9NQ25 335 aa15.3■□□□□ 0.04
C9orf3-206ENST00000428313 TLR8Q9NR97 1041 aaKnown RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 IMP3Q9NV31 184 aaKnown RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 ZNF624Q9P2J8 865 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 TESQ9UGI8 421 aaKnown RBP15.3■□□□□ 0.04
C9orf3-206ENST00000428313 TREHO43280 583 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 RGS11O94810 467 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 LRATO95237 230 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 C1SP09871 688 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 TFPIP10646 304 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 AQP1P29972 269 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 HEPACAMQ14CZ8 416 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 SLC25A30Q5SVS4 291 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 CEACAM20Q6UY09 585 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 BTN2A1Q7KYR7 527 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 ZER1Q7Z7L7 766 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 CMIPQ8IY22 773 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 COQ8AQ8NI60 647 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 MS4A3Q96HJ5 214 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 OR4K3Q96R72 315 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 C7orf50Q9BRJ6 194 aaKnown RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 SORBS1Q9BX66 1292 aaKnown RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 NKX6-2Q9C056 277 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 RNF32Q9H0A6 362 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 GAREM1Q9H706 876 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 EVA1AQ9H8M9 152 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 EQTNQ9NQ60 294 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 DTX4Q9Y2E6 619 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 OARD1Q9Y530 152 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 IRGMA1A4Y4 181 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 GABRR3A8MPY1 467 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 LOC730098B7Z3J9 87 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 TLR5O60602 858 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 FABP1P07148 127 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 CHRM5P08912 532 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 CXCL2P19875 107 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 TNFRSF1BP20333 461 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 RORAP35398 523 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 CD96P40200 585 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 WDR5P61964 334 aaKnown RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 GRIN2CQ14957 1233 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 PDZD9Q8IXQ8 264 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 ZNF454Q8N9F8 522 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 OR8J2Q8NGG1 315 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 ADAMTS19Q8TE59 1207 aa15.29■□□□□ 0.04
C9orf3-206ENST00000428313 GEMIN6Q8WXD5 167 aaKnown RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 MTFMTQ96DP5 389 aaKnown RBP15.29■□□□□ 0.04
C9orf3-206ENST00000428313 ELMOD3Q96FG2 381 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms