RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 ADARB1P78563 741 aaKnown RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 KRT80Q6KB66 452 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 MCATQ8IVS2 390 aaKnown RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 ARHGEF39Q8N4T4 335 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 SPPL2AQ8TCT8 520 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 GABARAPL1Q9H0R8 117 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 RAB23Q9ULC3 237 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 DPPA5A6NC42 116 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 H0YAE9 185 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 EMC8O43402 210 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 ALBP02768 609 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 OR12D1P0DN82 309 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 SIM1P81133 766 aaPredicted RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 RPS26P11Q5JNZ5 115 aaPredicted RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 FAM92BQ6ZTR7 304 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 TSEN54Q7Z6J9 526 aaKnown RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 ST13P4Q8IZP2 240 aaPredicted RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 LRRC25Q8N386 305 aaPredicted RBP25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 OR4K14Q8NGD5 310 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 ELP4Q96EB1 424 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 TCTN2Q96GX1 697 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 PNPLA3Q9NST1 481 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 P2RX2Q9UBL9 471 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 ZNF451Q9Y4E5 1061 aa25.05■■□□□ 1.6
SH3GL3-202ENST00000427482 PGM3O95394 542 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 CTSBP07858 339 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 DNAJA1P31689 397 aaKnown RBP25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 MC3RP41968 323 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 EPHA4P54764 986 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 PRR5P85299 388 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 CEP68Q76N32 757 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 ARMC8Q8IUR7 673 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 OR5D16Q8NGK9 328 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 MIPOL1Q8TD10 442 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 FBXL20Q96IG2 436 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 DNAAF2Q9NVR5 837 aaKnown RBP25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 TRPC4Q9UBN4 977 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 SPACA6W5XKT8 324 aa25.04■■□□□ 1.6
SH3GL3-202ENST00000427482 FPR1P21462 350 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 CTSKP43235 329 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 ANXA11P50995 505 aaKnown RBP25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 XKP51811 444 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 PRKAG1P54619 331 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 PRTGQ2VWP7 1150 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 ISLR2Q6UXK2 745 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 USP51Q70EK9 711 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 SLC44A2Q8IWA5 706 aaPredicted RBP25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 CA13Q8N1Q1 262 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 METTL25Q8N6Q8 603 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 GEMIN6Q8WXD5 167 aaKnown RBP25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 NPLQ9BXD5 320 aaPredicted RBP25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 SOX17Q9H6I2 414 aaPredicted RBP25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 C3orf14Q9HBI5 128 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 THSD1Q9NS62 852 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 CSNK1G3Q9Y6M4 447 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 RNF215Q9Y6U7 377 aa25.03■■□□□ 1.6
SH3GL3-202ENST00000427482 PRAMEF27A3QJZ7 478 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 TMEM247A6NEH6 219 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 RHPN2P1A8MT19 583 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 KIF1CO43896 1103 aaKnown RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 SRPX2O60687 465 aaPredicted RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 PDE9AO76083 593 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 HMGN2P05204 90 aaKnown RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 TNFRSF1BP20333 461 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 PRKACGP22612 351 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 LTB4RQ15722 352 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 ZIK1Q3SY52 487 aaPredicted RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 C6orf132Q5T0Z8 1188 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 ANKRD34AQ69YU3 496 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 USP53Q70EK8 1073 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 OR5T3Q8NGG3 340 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 NRBF2Q96F24 287 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 RAB33BQ9H082 229 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 REEP1Q9H902 201 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 PRMT8Q9NR22 394 aaPredicted RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 NDUFAF4Q9P032 175 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 SAMHD1Q9Y3Z3 626 aaKnown RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 TLCD2A6NGC4 264 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 SLC28A2O43868 658 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 SMIM18P0DKX4 95 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 TDGF1P13385 188 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 ARHGDIAP52565 204 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 GFERP55789 205 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 EPS8Q12929 822 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 COL9A2Q14055 689 aaPredicted RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 LASP1Q14847 261 aaKnown RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 LYSMD4Q5XG99 296 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 WDR5BQ86VZ2 330 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 SMYD1Q8NB12 490 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 NUP43Q8NFH3 380 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 XAGE5Q8WWM1 108 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 BARD1Q99728 777 aaKnown RBP25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 EPHA6Q9UF33 1036 aa25.02■■□□□ 1.6
SH3GL3-202ENST00000427482 A0A1B0GTW7 788 aa25.01■■□□□ 1.59
SH3GL3-202ENST00000427482 PRAMEF25A6NGN4 478 aa25.01■■□□□ 1.59
SH3GL3-202ENST00000427482 CYR61O00622 381 aa25.01■■□□□ 1.59
SH3GL3-202ENST00000427482 SYPL1Q16563 259 aa25.01■■□□□ 1.59
SH3GL3-202ENST00000427482 SLC25A45Q8N413 288 aa25.01■■□□□ 1.59
SH3GL3-202ENST00000427482 ARL10Q8N8L6 244 aa25.01■■□□□ 1.59
SH3GL3-202ENST00000427482 KAT2AQ92830 837 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms