RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CAMK1DQ8IU85 385 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 GALNT13Q8IUC8 556 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 CENPLQ8N0S6 344 aaPredicted RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 TAGAPQ8N103 731 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 PYROXD2Q8N2H3 581 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 BBS5Q8N3I7 341 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 CCNYL1Q8N7R7 359 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 ANKFN1Q8N957 763 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 C11orf65Q8NCR3 313 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 GPRC5AQ8NFJ5 357 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 IPMKQ8NFU5 416 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 TSPAN14Q8NG11 270 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 MAPK15Q8TD08 544 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 KCTD4Q8WVF5 259 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 PPWD1Q96BP3 646 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 L3HYPDHQ96EM0 354 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 NRBF2Q96F24 287 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 SLC45A3Q96JT2 553 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 CNDP2Q96KP4 475 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 SERPINB11Q96P15 392 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 DDX50Q9BQ39 737 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 C16orf70Q9BSU1 422 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 MLPHQ9BV36 600 aaPredicted RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 FICDQ9BVA6 458 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 NUSAP1Q9BXS6 441 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 SLC2A11Q9BYW1 496 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 CAB39LQ9H9S4 337 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 CLK4Q9HAZ1 481 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 WDR6Q9NNW5 1121 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 ARMC1Q9NVT9 282 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 CHCHD3Q9NX63 227 aaKnown RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 ABCD2Q9UBJ2 740 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 PLEKHB1Q9UF11 243 aaPredicted RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 APPL1Q9UKG1 709 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 BLOC1S6Q9UL45 172 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 FAF1Q9UNN5 650 aaPredicted RBP4.78□□□□□ -1.64
LINC00458-202ENST00000427299 MFHAS1Q9Y4C4 1052 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 KIAA1671Q9BY89 1806 aa4.78□□□□□ -1.64
LINC00458-202ENST00000427299 ANKRD12Q6UB98 2062 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PLXNA4Q9HCM2 1894 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SMIM28A0A1B0GU29 152 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 DHRS12A0PJE2 317 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 MBLAC1A4D2B0 266 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SYCE1LA8MT33 242 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 A8MT66 165 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 H3BNH8 94 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 DFFAO00273 331 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 UBE2CO00762 179 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SLC7A4O43246 635 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CRCPO75575 148 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ZMPSTE24O75844 475 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 HEXAP06865 529 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SPARCP09486 303 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SMIM10L2AP0DMW4 78 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SMIM10L2BP0DMW5 78 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 UMPSP11172 480 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 HSD17B1P14061 328 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CDH2P19022 906 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 OGNP20774 298 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SAT1P21673 171 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 FASP25445 335 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 NFKBIAP25963 317 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 NMBRP28336 390 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 HMOX2P30519 316 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CCR1P32246 355 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 RPL9P32969 192 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 RANBP1P43487 201 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 LEPRP48357 1165 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CENPAP49450 140 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CXCR3P49682 368 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PDLIM4P50479 330 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ERFP50548 548 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ARSFP54793 590 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PKNOX1P55347 436 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 NME5P56597 212 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 MAP3K7CLP57077 242 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 HERVK_113P63132 956 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 MYBPC1Q00872 1141 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PEX6Q13608 980 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CEACAM7Q14002 265 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 GRB14Q14449 540 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 POU6F1Q14863 301 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 GPR139Q6DWJ6 353 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PM20D1Q6GTS8 502 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 TWF2Q6IBS0 349 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 FBXL22Q6P050 247 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CYP20A1Q6UW02 462 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CES3Q6UWW8 571 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ABRAXAS1Q6UWZ7 409 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 IL20RBQ6UXL0 311 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PATL1Q86TB9 770 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 TAC4Q86UU9 113 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 GHDCQ8N2G8 530 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 AADATQ8N5Z0 425 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 NPWQ8N729 165 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 RTL3Q8N8U3 475 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 KDM1BQ8NB78 822 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ITFG2Q969R8 447 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SGF29Q96ES7 293 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 RDH12Q96NR8 316 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms